Opacimonas immobilis: ACM613_04625
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Entry
ACM613_04625 CDS
T11110
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
oim Opacimonas immobilis
Pathway
oim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM613_04625 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oim03019
]
ACM613_04625 (rhlB)
Enzymes [BR:
oim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACM613_04625 (rhlB)
Messenger RNA biogenesis [BR:
oim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACM613_04625 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SgrT
AAA_22
DUF7511
Motif
Other DBs
NCBI-ProteinID:
XPD36451
LinkDB
All DBs
Position
complement(986585..987823)
Genome browser
AA seq
412 aa
AA seq
DB search
MQNTHLTDTRFQDLPINIKVQSALNKANFEHCTPIQAMALPPLLAGNDVAGQAQTGTGKT
IAFLVATYHKLLEKETTHGKPRAIIMAPTRELAVQIHSDAKILSQETSLSCGLIYGGEGY
ENQRQQLQNGVDIIIGTTGRIIDFYKQGAFSLEHIEVAVLDEADRMFDLGFIKDIRFLFR
RMPKPSQRLSMLFSATLSFRVQELAYEHMNTPTHVEVAPEQKTGERIQEELFYPSGQDKM
RLLLTLIEDEWPDRAVVFANTKHECENVTAWLKADGHRVGLLSGDVPQKKRLQILQQFTQ
GHLDFLVATDVAARGLHINKVSHVFNYDLPDDAEDYVHRIGRTGRAGETGHAISFACEKY
ALNLPAIEEYIDHQIPVSEYDAEMLLTDIKAPKPTTRKRHGKPNHRKPRANK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacactcacttaacagatactcgattccaagatttgccaatcaatattaaggta
caaagtgctttaaataaagctaattttgaacactgcacaccgattcaggcgatggcactg
cccccattgttggcaggcaatgacgttgcgggtcaagcgcaaacaggaacgggcaaaacc
attgcttttttagtagcaacctatcataaattgctcgaaaaagagacaactcatggcaaa
cctagagcaatcatcatggctccaactcgtgagttagccgtccaaatacacagtgatgct
aaaatacttagtcaagaaactagcctatcttgtggcttgatatatggtggcgaaggatac
gaaaatcaacgtcaacaattacaaaacggtgtcgatatcattattgggacaactggtcgg
attatcgatttttacaagcaaggagctttcagcttagagcatatcgaagttgccgttctc
gatgaagcagatcgtatgttcgacctgggctttattaaagatattcgatttttgtttcgc
cgtatgccaaaaccctcgcaacgcttgagtatgttgttttcagcaaccttaagttttcgt
gtccaggagctcgcatatgagcatatgaacacccctactcatgttgaggttgcaccagaa
caaaaaaccggtgaacgcattcaagaagagttgttctatccgtcaggccaggacaaaatg
cgcttgctgttgacgctgatcgaagatgaatggccagatcgtgctgtggtctttgccaac
accaaacacgagtgtgaaaatgtcaccgcttggctcaaagcagatgggcacagagtaggt
ttacttagtggtgatgtgccgcaaaagaaacgcttacaaatactacaacaatttactcaa
gggcatttggactttttagtcgccactgatgtggctgctcgtggacttcatataaacaaa
gtgtcccatgtctttaactatgatctacctgatgatgcggaagattacgtccatcgcatt
ggtcgtacaggtcgtgcaggagagactggacacgccattagttttgcctgtgaaaaatac
gccttgaatttacccgctatagaggagtatattgatcatcaaataccagtaagtgaatat
gatgctgaaatgcttttaacggacataaaagcccccaaaccaacgacaaggaagcgccat
ggaaagccaaatcatcgcaaaccaagggctaacaaatag
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