Opacimonas immobilis: ACM613_04670
Help
Entry
ACM613_04670 CDS
T11110
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
oim Opacimonas immobilis
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oim03021
]
ACM613_04670 (rapA)
Transcription machinery [BR:
oim03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACM613_04670 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
SNF2-rel_dom
Helicase_C
Tudor_1_RapA
ResIII
Tudor_RapA
DEAD
Pox_A3L
SLFN-g3_helicase
AAA_22
AAA_34
Motif
Other DBs
NCBI-ProteinID:
XPD36460
LinkDB
All DBs
Position
complement(994914..997673)
Genome browser
AA seq
919 aa
AA seq
DB search
MIGQRWLNSQQPELGLGLVTEVQGRQVALYFPLVDSDARYASESAPLLRFTLDVGECAQD
INNRTFEVISSDEDNGLMSYEVEYPNGARTTLFETQIAHHLQINQPEKRLFNGQINHTAW
FDVRHQTYQAQYKHNTHPGIGLLGARMTPLEHQVNIVQQVGQRFAPRVLLADEVGLGKTI
EAAMILHKQILLGRCQRALIIVPESLQHQWLVELHRRINMMFSLFDEERLEALSDENDNP
WLTAQWVITNVSTLQAQPQALQQLCETPWDCLIVDEAHHLTEQSSHNSEYEAIAKLCQLI
PSVLLLTATPDQQGSDAHFAQLQLLDPNRFTSAEQFHAEQASYQALADLSDALLSCTQLD
HDLIARCHEFLPELSISDIADKSVFELIQELIDRHGTGRLFYRNTRKAIGHANARQVIAH
PLDSPEEYTTIKDRVIAHIHEDTDWVKDWLEQDPKVNWLLEFLQNARGKTLLICRTARAV
LELAEHIRIKRGISLPVFHEQMSISERDRAAHFFADDEDGAPMLLCSEIGSEGRNFQFCQ
QLILFDLPLNPDLLEQRIGRLDRIGQTSQVEIIVPFHRNSAQERLFRFFDVGLNAFNQTC
TVGNEVLTELGQPLAKLIQDPDFDAELPNIASLTKNLVTAQEQGRNKLLELNAKGFDQHA
DIIAALDDEAEGEEVYQYLSSMADVVGFKFIINDHVSYVIQPTEDLLYPLQTLPDEGMTV
TFSRRVATAREDYHFISFEHPFVRELMATLLSDNTGKASIGLFSDSNKPVGAFIVQCQFV
IQAASQAEHNPYLTPQSFVVSCDHANQIFNETVESIHRVKKVIAAKLITALAAQIKQAIR
TCENTALEQAVHIKNNALQHMQLTLGTELERLHYLQHINPAVRPEEISILEAQLREACWQ
IENAPVNLDSIRVLVNNPQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtgattggacaacgttggcttaacagccaacaacccgagctaggattaggcttagtaacc
gaagtacaaggacgccaagtcgctttgtattttcctcttgtcgatagcgacgcgcgctat
gcaagcgaatcggctcctttattgcgtttcaccttagacgtcggtgaatgtgctcaagac
atcaataaccgtacctttgaggtcataagctctgacgaagacaatggattgatgagctat
gaggtagaatatccaaacggtgcgcgtaccactctctttgaaacccaaatcgcgcatcac
ttacaaatcaatcaacctgaaaaacgcctattcaatggccagatcaatcataccgcttgg
tttgatgtgcgccatcaaacctaccaagcacaatacaaacacaacactcatcctgggata
ggcctattgggtgcacggatgacgccactggagcatcaagtgaatattgttcagcaagta
ggccagcgttttgccccaagagtactccttgctgatgaagtaggcttgggtaaaaccatc
gaagcggcgatgattttgcacaaacaaatcttactgggtcgctgccaacgagctttgatc
atcgttcctgagtcattgcaacaccaatggctggttgaattgcatcgccgcatcaatatg
atgttttctttgttcgatgaagaacgacttgaagcattgagcgatgaaaatgacaatcca
tggctaactgctcaatgggtcattaccaatgtgagtaccttacaagcgcaacctcaggct
ctacaacaactgtgtgaaacgccttgggactgcttaattgtcgacgaggcacaccatctc
accgagcaaagctctcacaatagcgaatatgaggcgattgccaaactatgtcaactcatc
ccaagtgtgttactactcactgcgactcctgatcaacaaggtagcgacgcccattttgca
caattacagctacttgatccaaatcggtttaccagtgcagagcaatttcatgctgaacag
gctagctatcaagcccttgcggatttaagtgatgccttattgtcttgcacacagttggat
cacgatttaattgctcgttgtcatgaatttttgcccgaattaagcatttcagatattgct
gacaaaagtgtctttgaattaattcaagaactcatcgatcggcacggtacgggaagacta
ttttatcgcaacacacgcaaggccattggccatgctaatgctcgacaggtgattgctcac
ccactagattccccggaagaatacacgacaattaaagacagagtaattgcccacattcat
gaagataccgattgggtaaaagattggcttgaacaggatccaaaggtcaattggcttttg
gaatttttacaaaatgctcgaggaaaaacccttttaatctgtcgaaccgctcgggccgtt
cttgaattagcagaacatatccgtatcaagagaggtatttcattacctgtatttcatgaa
caaatgagtattagtgagcgggatcgagcggcacatttcttcgccgatgacgaagatggc
gcccccatgctattgtgttcagaaattggctcagaaggtcgaaatttccagttttgtcag
caacttattttattcgatctgccacttaatccagatttgttagaacaacgcattggacgc
ctggatcgcatcgggcaaaccagtcaggtcgaaattattgtgccttttcatcgcaatagt
gcgcaagaacgccttttccgattttttgatgtcggtctgaatgcgtttaaccaaacctgt
actgtcggaaatgaagtgttaacggaactcggacaacctttggctaagctgatacaagat
cctgactttgatgccgaattaccgaatattgcctcactcaccaaaaacttggttacggca
caagagcaaggcagaaacaaactactcgaacttaatgccaaaggttttgaccaacatgca
gacattatcgccgcacttgatgatgaagctgaaggtgaagaggtttatcagtatttaagc
tctatggcagatgtggttggctttaaatttatcatcaatgatcacgtgagctatgtcata
caacctacagaagatttgttatacccattacaaaccttaccggatgaaggtatgacggtg
acattttcaagacgcgtagccaccgctagagaagactatcattttatcagttttgaacat
ccattcgtgcgtgaactaatggcaacattactcagtgataacacagggaaagccagcatc
ggtctattttcagatagtaataaaccggttggggcgtttattgtgcaatgtcaatttgtg
atacaagcagcatctcaagctgagcacaacccctatttgactccgcaaagttttgttgtg
agctgtgatcatgcaaatcaaatcttcaatgagactgttgagtcgattcacagagtcaaa
aaagtcatcgcagccaaactgatcaccgccttggcagcccaaattaaacaagccataagg
acgtgcgaaaacactgccttagaacaagcagtgcacattaagaataacgctctccaacac
atgcaattaacactcgggaccgagctggaacgtttgcactatttgcaacatatcaaccca
gctgtaagacctgaagaaatcagtatattagaggcacagttgcgcgaggcatgctggcaa
atcgaaaacgcaccagtcaaccttgactcgatacgtgtccttgtcaataacccacaataa
DBGET
integrated database retrieval system
