Opacimonas immobilis: ACM613_07160
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Entry
ACM613_07160 CDS
T11110
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
oim Opacimonas immobilis
Pathway
oim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACM613_07160 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oim03400
]
ACM613_07160 (uvrB)
DNA repair and recombination proteins [BR:
oim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACM613_07160 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACM613_07160 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
Kinesin
CENP-O
Microtub_bd
DUF8810
Motif
Other DBs
NCBI-ProteinID:
XPD34698
LinkDB
All DBs
Position
1518847..1520865
Genome browser
AA seq
672 aa
AA seq
DB search
MAKPFTIQSKYSPAGDQPTAIAQLVEGLEAGLAQQTLLGVTGSGKTFTMANVIAEVQRPT
LILAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDSSINDHIE
QMRLSATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDIAFERGAFRVRGDVIDIFPADSEKQAIRVELFDAEIEKISYFDPLTGEVEKSVAR
ATVFPKTHYVTPRERILNAVENIKDELEQRRTQLKEANKLLEEQRISQRTQFDIEMMLEL
GFCSGIENYSRYLSGRAPGEPPPTLIDYFPKDGLLIIDESHVTVSQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEHISPQTIYVSATPGNYELEKCSGEIVEQVVRPTGLLD
PVIEIRPVATQVDDVLSEINKRVELNERVLITTLTKRMAEDLSEYLNENGVKVRYLHSDI
DTVERIEIIRDLRIGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAEKSLIQTIG
RAARHLNGRAILYADKITGSMKKAIDETERRRAKQQAHNEANGITPQSLIKPITDIMDIG
DDDAHPASGKVKLRKVAEKEKKYKAMTATDIMGKISELEQQMFEAARELEFEKAASIRDE
IEQLRAEAVKIS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagccttttacaattcaatccaaatattctccagcgggtgaccagcctaccgcc
attgcacaattagttgaaggtttagaggcggggttggcacaacaaacattattgggtgtg
acgggttctggtaaaacttttaccatggccaatgtcattgccgaggtacaaagacccacg
ctgattttagctcataacaaaactcttgctgctcagttatatggagagatgaaagaattt
ttcccgaataacgccgtagagtattttgtttcatattacgattactatcagccagaagca
tatgtgccatcgaccgatacgtttatcgaaaaagactcctcgatcaacgaccacattgag
caaatgcgtttatccgcaacaaaggctttgatggagagaagagatgttgtgatagtcgca
tccgtgtcggcgatttatggtttaggcgatcccgaatcgtacatgaagatgttattgcat
ctgcgtcaaggcgatacgatggatcagcgtgatatattacgccgattggcagaattgcaa
tataaacgaaatgacattgcttttgaacgcggcgcatttcgggtgcgtggtgatgtgatt
gatattttccctgcagattctgagaagcaagcgatccgtgtcgagttgtttgacgctgag
attgagaagatcagctactttgatccacttacgggtgaggtggaaaaatctgtcgcacga
gcaaccgtctttcctaaaacgcattatgtgacgccacgagagcgtatcttgaatgccgtt
gaaaatataaaagacgaattagaacagcgccgcacacaacttaaagaagccaataaacta
ctggaagaacagcgtatttctcaacgtacccagtttgacattgaaatgatgctggaattg
ggattttgttcagggatcgaaaactattcgcgttacttgtcaggccgagcacccggcgaa
ccaccaccgacattaattgactactttcccaaagatggcttgttgatcattgatgaatcg
catgtaaccgtatcgcagattggcgccatgtataaaggggaccgttcgcgaaaagaaacc
ttggttgagtacggttttcgtttgccttctgcactggataatcggccactcaaattcgac
gagtttgagcatatctcccctcagacgatttatgtgtcggcgacccctggaaactacgag
cttgaaaagtgctcaggcgaaatagtcgagcaagttgtcagaccaacggggcttcttgat
cctgttatcgagatacgtcctgtggcgacacaagtagatgatgtattgtctgaaatcaat
aaacgtgtagagcttaatgaacgggtattgattaccacattgaccaagcgtatggccgaa
gatttgtcggaataccttaacgagaatggtgtaaaagtcagatacttgcattcagatata
gatacagtggagcggatcgaaatcattcgcgatttgcgaattggtaagtttgatgtatta
gtagggattaacttgctaagagaaggcttggatatgcctgaagtgtctttagttgcgatt
ctagatgcggataaagaaggttttctgcgtgcagaaaaatccctcattcaaactattggc
cgtgctgctcgtcaccttaatggacgtgcgattttgtatgcggataaaatcaccggctcg
atgaaaaaagccattgatgaaacggagcgtcgccgcgccaagcaacaagctcataatgag
gcaaatggtattactccgcaatccttgatcaaaccaatcaccgacatcatggatattggc
gatgacgatgcccatccagcatccggtaaggtgaagctgcgcaaagtggctgaaaaagag
aagaaatacaaagccatgaccgcgaccgatatcatgggtaaaatcagtgaattagagcaa
caaatgtttgaggccgcacgcgaactggaatttgaaaaagccgcgagtattcgcgatgaa
atcgaacaattacgcgccgaagcggtcaagatttcttaa
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integrated database retrieval system
