Opacimonas immobilis: ACM613_08050
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Entry
ACM613_08050 CDS
T11110
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
oim Opacimonas immobilis
Pathway
oim03030
DNA replication
oim03430
Mismatch repair
oim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACM613_08050 (dnaQ)
03430 Mismatch repair
ACM613_08050 (dnaQ)
03440 Homologous recombination
ACM613_08050 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oim03032
]
ACM613_08050 (dnaQ)
03400 DNA repair and recombination proteins [BR:
oim03400
]
ACM613_08050 (dnaQ)
Enzymes [BR:
oim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACM613_08050 (dnaQ)
DNA replication proteins [BR:
oim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACM613_08050 (dnaQ)
DNA repair and recombination proteins [BR:
oim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACM613_08050 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XPD34864
LinkDB
All DBs
Position
1724748..1725464
Genome browser
AA seq
238 aa
AA seq
DB search
MRQIVLDTETTGMNRETGGHFTEGHRIIEIGCVELVDRKLTGNHFHVYINPQQPVDPEAF
AVHGISDDFLADKPVFKDVAQDFINFIQDAEIIAHNAPFDVGFMNLEFAMNPATALIRTD
QICQVTDSLELAKKLRPGQRNNLDALCKEYGIDNSHRDLHGALLDAEILADVYLLMTSSQ
EVLSLDQHTAQSDASGIVRITPPQKPLKVLSATADEIEAHEARLDIIEQAGGTCLYRQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaattgttttagatactgaaacgaccgggatgaaccgcgaaacggggggccat
tttaccgaaggccatcggattattgaaatcggttgtgttgaactggttgatcgaaagttg
accggcaatcatttccatgtgtacatcaatccgcagcaaccagttgatcctgaagcattt
gctgtgcatgggatcagtgatgactttttggcagataaaccggtgttcaaagacgtcgcc
caagatttcattaattttatccaagatgcagagattattgcccataatgcaccgtttgac
gtgggctttatgaacttggaatttgccatgaatccagccacggctctgatccgtacagat
caaatctgtcaggtgacggatagtttggagctcgccaaaaagcttcgtccaggacagcgt
aataacctggatgctttgtgtaaagaatacggtattgataactcacatcgcgatttgcac
ggagcattgctcgacgccgagatccttgccgatgtgtatttgttgatgacctcatcacaa
gaagtgttgagccttgaccaacacactgcgcaaagtgatgcatctgggattgtacgcatt
acgcccccacaaaaaccattaaaggtattaagtgccacggccgatgaaatagaggcgcat
gaagcgcgtcttgatatcattgaacaagcaggagggacgtgcttgtatcgccaatga
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