Opacimonas immobilis: ACM613_09300
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Entry
ACM613_09300 CDS
T11110
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
oim Opacimonas immobilis
Pathway
oim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACM613_09300 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oim03400
]
ACM613_09300 (xthA)
Enzymes [BR:
oim01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACM613_09300 (xthA)
DNA repair and recombination proteins [BR:
oim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACM613_09300 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
DUF3014
Motif
Other DBs
NCBI-ProteinID:
XPD35102
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All DBs
Position
1997426..1998232
Genome browser
AA seq
268 aa
AA seq
DB search
MKIISFNINGVRARLAQLQSVIDLHQPDIIGLQEIKVDNAQFPVDDIKAMGYDVVYHGQK
AHYGVATLSKRSIKQVQYGLPTDHDDKQKRLIGVTIENDQGEDVTIYNGYFPQGENINHA
TKFPYKVEFYKDLTEHLYQAHTADEHIIVMGDINISPLDLDIGIGEPNQKRWLKTGKCSF
QPVEREMLATLQDFGLVDTFRALYPTKTERYSWFDYRSKGFDDNRGLRIDVILATPSMAQ
KCIESEICYVSRGLDKPSDHAPIFAEFK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatctcatttaatatcaacggagtccgcgctcgccttgcacaattacagtcg
gttattgatttgcaccagccagatatcattggcctgcaggaaatcaaagtcgataatgct
cagttcccagttgatgatattaaagccatgggttacgacgtggtatatcacggtcaaaaa
gcacactatggtgtggcgaccttatccaaacgcagtatcaaacaagtccagtacggtttg
ccaacagatcacgatgacaaacagaaacgtttgattggcgtaacgatcgaaaatgatcaa
ggcgaagacgttacgatttacaacgggtattttcctcaaggtgaaaatatcaaccatgca
accaaattcccatataaagttgagttttacaaagatttaacggagcatctgtaccaagca
cacacagcagatgaacacatcattgtcatgggggatattaatatttcgccccttgattta
gacatcggcattggtgaaccgaatcaaaaacgctggctaaaaaccggcaaatgctctttc
caacctgtcgaacgcgaaatgctcgcaacgctgcaagattttggtttggtcgatacattc
cgcgcactatatccaactaagaccgagcgctattcttggtttgattatcgatcaaaaggc
tttgacgacaatcgaggactgcgtattgacgtgatattggccacgccatctatggcgcaa
aaatgcatcgaatctgaaatatgttacgtctctagggggttagataagccatctgaccat
gcacctatttttgcagagttcaaataa
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