Opacimonas immobilis: ACM613_10380
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Entry
ACM613_10380 CDS
T11110
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
oim Opacimonas immobilis
Pathway
oim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACM613_10380 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oim03019
]
ACM613_10380 (pnp)
03016 Transfer RNA biogenesis [BR:
oim03016
]
ACM613_10380 (pnp)
Enzymes [BR:
oim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACM613_10380 (pnp)
Messenger RNA biogenesis [BR:
oim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACM613_10380 (pnp)
Transfer RNA biogenesis [BR:
oim03016
]
Prokaryotic type
tRNA degradation factors
ACM613_10380 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
HrcA
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
XPD35303
LinkDB
All DBs
Position
complement(2227569..2229695)
Genome browser
AA seq
708 aa
AA seq
DB search
MTPITTSFQYGQHTVTLETGVIARQATAAVMASMDDTSVLVTVVGKKEAKADQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFKNEVQVVITVVSAN
PEIPTDIVSMIGTSAALAISGIPFNGPIGAARVGYQNGEYILNTRTSEMEASQLDLVVAG
TQSAVLMVESEADVLSEETMLGAVVFGHEQSQTVINAVNEFAAKVNTPKWDWQPEAENTE
LKNKVAELAKEGMTAAYQISDKLERKAAVEAVTAKALEAILAEDESQDAKEVSNLLHDLE
SDVVRSRILAGEPRIDGRDPAMIRALDVATGLLPRTHGSALFTRGETQAIVAATLGTERD
AQMIDELGGVTNSRFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSMEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDDNFVVLSDI
LGDEDHLGDMDFKVAGTAEGVTALQMDIKIEGITQEIMQIALKQAKEARLHILGVMDQAI
QGHREELSEFAPRIYTMKVESDKIRDVIGKGGATIRSITEESDTNIEIEDDGTIKIFATE
KAKADIAIARIEAVTAEIEVGKVYTGKVARIADFGAFVEVLPGKDGLVHISQIAHERVAK
VTDYLSEGQEVQVKVMEIDRQNRVRLSMKELIEKPVQEAPQDDAPDAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactacctctttccagtatggacagcatactgtgacattagaaactggc
gtgattgcacgtcaagcaactgccgcggtcatggcaagcatggatgatacctctgtttta
gttaccgttgttggcaaaaaagaagctaaagcggaccaagatttcttcccattaacggtg
aattatcaggaaaaagcgtacgcagcaggtaagatccctggtggttttttcaaacgcgaa
ggccgcccttcagaaggtgaaacgttgattgcgcgtttaattgaccgcccaattcgtcca
ctttttccggaaggttttaaaaatgaagttcaagtcgttattaccgttgtttctgctaac
ccagaaattccaactgacatagtttcaatgattggtacctctgcggcgttagctatttca
ggtattccatttaacggcccaattggtgccgcacgtgttggttatcaaaacggtgaatac
attttaaatactcgcacttcagaaatggaagctagccaacttgatttagttgttgctggt
acgcaatctgcagtattaatggttgaatcagaagcggatgtattgtctgaagaaacaatg
cttggtgcggttgtatttggccatgaacaatctcaaacggtcattaatgccgttaatgaa
ttcgcagccaaagtaaatacgccgaagtgggattggcagccagaagccgagaacacagaa
cttaaaaataaagttgcagagcttgctaaagaaggtatgacagcagcatatcaaatctca
gataagctagaacgcaaagctgcagttgaagcagtaacggcaaaagccctagaagcaatt
cttgccgaagatgagtcacaggacgcaaaagaagtttctaatcttttacatgacctagaa
tctgatgtggtacgttcacgcatccttgctggtgagccgcgtattgatggtcgtgacccg
gctatgatccgtgcacttgatgtagcaacaggtttgttaccacgtacgcatggttctgca
ttgtttactcgtggtgaaacgcaagctattgtcgctgcgacgcttggtactgagcgtgac
gcccagatgattgatgagctaggtggagtcaccaactcgcgctttatgctgcattacaat
ttccctccttactgcgttggtgagacgggtatgattggttctcctaagcgtcgtgaaatt
ggccatggtcgtttggcaaaacgcggtattcaagcagtgatgccttcaatggaagaattc
ccttacgtggttcgagttgtatcggaaatcactgagtcaaacggttcatcttcgatggca
tctgtttgtggtacttctctagcgttaatggacgcgggtgtaccaattaaagcatctgtt
gcgggtattgcaatgggcttggtcaaatcagatgataacttcgtcgtattgtcggatatc
ttaggtgatgaagatcaccttggtgatatggactttaaggtagccggtactgcagaaggt
gttaccgcgctacagatggacattaagatcgaaggcattactcaagagatcatgcagatc
gcattaaaacaagcaaaagaagctcgtttacatattcttggtgtaatggaccaagcaatc
caggggcatcgtgaagagttatcagaatttgcgcctcgtatttacacgatgaaagtggaa
tctgataaaattcgcgatgtcatcggtaaaggcggtgcaacgattcgttcgattacggaa
gagtctgatactaatatcgaaatcgaagatgacggtaccattaagatttttgccactgaa
aaagccaaagcagatattgccattgcacgtatcgaggcagtaactgcagaaatcgaagtc
ggcaaggtctacaccggtaaagttgctcgcatcgcagattttggagcgtttgttgaagta
ttacctggtaaagatggcttggttcacatttcacaaattgcacacgagcgtgttgctaag
gtcactgattatttgagtgaaggtcaagaagttcaagttaaggtaatggaaattgaccgt
cagaaccgcgtgcgtttgagcatgaaggaactcattgagaagccagttcaagaagcgcca
caggatgatgcacctgacgctgaataa
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