Opacimonas immobilis: ACM613_10485
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Entry
ACM613_10485 CDS
T11110
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
oim Opacimonas immobilis
Pathway
oim00550
Peptidoglycan biosynthesis
oim01100
Metabolic pathways
oim01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACM613_10485 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACM613_10485 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oim01011
]
ACM613_10485 (mrdA)
Enzymes [BR:
oim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACM613_10485 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
oim01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACM613_10485 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
YqbF
Motif
Other DBs
NCBI-ProteinID:
XPD35323
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All DBs
Position
2247218..2249119
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AA seq
633 aa
AA seq
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MAKRRQAMRDYTAEDKLFLRRAFIAICLVAVVFGVLLLNMYQLQIVSFEDYQTRADGNRI
KVVPIAPNRGLIYDRNGVLLAENRPSFSLRMVKEQIRDIDETVAELSELLVINDEQLQEI
RDSIKNARRFQPVTILDNLNEEQVAKFSAQQHRFSGMFVEAGLTRYYPYADALTHVLGYI
AKINGQNLESIALRGQTSNYAATRFIGKQGIERYYEDRLHGSVGYKQVEVDNKGRELRVL
SVEEPIPGEDLVLNIDVQLQLFIQNIMREKRGSVVVSDPSTGQILAMFSNPSYDPNLFVR
GISQKEYNKLIQNTDRPLLNRAVQGQYPPASLIKPHLALLGLEYGVISEHSKIHDPGYYQ
LPEVSHRWRDWKKTGHGHVDVKYSIEVSCDTFFYELAYKLGIDTIHEYMTQFGFGLYTEI
DLAEETDGNMPSRGWKQARFNQPWYIGDTISIGIGQGYWTATPIQLLNSLNTLLNDGVRH
IPQILRGSLIQESLLEQGVSEFPPISMLQSRHWEHVRNSMRDTVGLPHGTAYGAYRNAKY
SSGGKTGTAQLFTVGQDEDVDEIEIADYLKDNAMYFGYAPVDTPEISVIVALENAGGGGS
NAAPLARQVMDYYLVDRTSRDATIAQQKVKFND
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgccgtcaggcaatgcgtgattataccgccgaagataagttgttcttgcgc
cgtgcattcatcgcaatatgtttggtcgccgttgtttttggggtgcttctccttaatatg
tatcaattacagatagtctcttttgaagattatcaaacccgagctgacggcaatcgtatc
aaggtggttccgatcgcgccaaatcgtgggttgatttatgaccgcaacggcgtcttatta
gcagaaaaccgtccttcgtttagcttgcggatggtcaaagaacaaattcgcgatattgac
gaaaccgttgccgaactttcagaactgcttgtcattaatgacgagcaattacaagaaatt
cgtgacagcatcaaaaatgcccgccgttttcaaccagtcactattttggataaccttaac
gaagaacaagtggctaaattttcagcgcaacagcatcgtttttcgggtatgtttgttgag
gccggtttgacccgatattacccgtacgccgatgcattgactcacgtgctcggttacatt
gccaaaatcaatggccaaaatctagaaagcatcgctttaagaggtcaaacttcgaactat
gccgcaacgcgttttattggcaaacaaggcattgaacgctactatgaggacagactccac
ggtagcgttggttacaaacaagtcgaagtcgataataaaggccgggaattacgagtatta
tctgttgaagaaccgattcctggagaggatttggttctaaatatcgatgtgcagctacaa
ttgtttatccaaaatatcatgcgagaaaaacgcgggtcagtggttgtttcagatcctagc
actgggcaaatcttagcgatgttttcaaatcctagttatgatcccaatttgtttgttcgt
gggatcagccaaaaagaatacaacaaacttatccaaaataccgaccgtccattattaaat
cgtgccgtacaaggacaatatccccccgcatctttgattaaaccccatcttgctttactt
ggacttgaatacggtgtcatttcagaacacagtaaaatccacgacccgggttattatcaa
ctacctgaagtatctcaccgctggcgcgattggaagaaaacaggccacggacatgttgat
gtcaaatattcaattgaagtatcttgtgatacctttttttatgagctggcttataagttg
ggcattgacaccatccatgaatatatgactcaatttggttttggcttatataccgaaatt
gatttggctgaagaaaccgacggtaatatgccatctcgtggatggaaacaagcccgtttc
aatcagccttggtatattggtgatacgatttctataggtattggtcaaggttattggaca
gcgactccgattcagttacttaactcattaaacacgttactcaacgacggggttcgccat
attccacaaattttaagaggttcgctgatccaagaatcattacttgaacaaggtgttagc
gaattccctccgatttcgatgctgcaatctagacattgggagcatgtacgaaattccatg
agggatactgttggactgccccatggaactgcatacggtgcgtatcggaatgccaagtat
tcatcaggtggcaagactggaaccgctcaattattcactgttgggcaagatgaagacgtt
gacgaaatagaaatagccgattatttgaaagacaacgcgatgtacttcggctatgcgcct
gttgatactcctgaaattagtgtcattgtggctttggaaaacgccggtggcggtggttct
aatgcagcccctctcgcacggcaagtgatggattactatctcgtagatcgaacatcacgc
gacgccacgattgctcagcaaaaggtcaagtttaatgactaa
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