Opacimonas immobilis: ACM613_10770
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Entry
ACM613_10770 CDS
T11110
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oim Opacimonas immobilis
Brite
KEGG Orthology (KO) [BR:
oim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oim03016
]
ACM613_10770 (truB)
Enzymes [BR:
oim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACM613_10770 (truB)
Transfer RNA biogenesis [BR:
oim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACM613_10770 (truB)
Prokaryotic type
ACM613_10770 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
XPD35378
LinkDB
All DBs
Position
complement(2309999..2310919)
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AA seq
306 aa
AA seq
DB search
MARSRKSGRAIDGVFLLDKPLGESSNRYLQRVRAIFNAKKAGHTGALDPLASGMLPICLG
ESTKFSQYLLDADKTYYVRAKLGIRTDTSDADGEVVETRPVTVGPEQIQQACLAYLGDSE
QVPSMYSALKHEGKPLYWYARQDITVERPARPITIFDMSVDDITDDEFALTVRVSKGTYI
RSLVDDIGQDLGCGAYVTELRRTRVADYPTEKMLTFDALQALADEHKDERFEVIDQYLLP
ADSPVASLPKCELTPAQRVGIQYGQAQRLTGGIEIGEYRMYCEGRFLGVGDLRADSHIYV
KRLVHN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtagtcgcaaaagtggccgtgccattgatggcgtgtttttattggataagcct
ttaggtgaatcgtcaaatcgctatttgcaacgtgttcgagccatttttaacgccaaaaaa
gccggtcatactggcgcccttgatcctctcgctagcggcatgctccccatttgtttgggt
gaatcgactaagttttcgcagtatttgttagatgcagacaaaacctattatgttcgtgct
aagctaggcattcgcacagacacctctgacgccgatggggaagtggttgaaacacgtcca
gtgacagtgggtcctgagcaaatccaacaagcatgccttgcctatctaggtgattccgaa
caagtgccttcgatgtattctgcgctcaaacatgaaggcaaacctctgtattggtatgca
agacaggatatcacagtcgagcgtcctgctcgtccaattaccatctttgatatgtcggta
gatgacattactgatgatgaatttgcgctcacagtgcgagtttcgaaaggtacttacatt
cggtcattggtcgatgatattgggcaggatttggggtgcggtgcttatgtgaccgaactg
cgacgcacacgtgttgcggattatccgacggagaaaatgttgacctttgatgcgctgcag
gcactcgcagatgaacacaaagacgagcgttttgaggtcattgatcaatacctattgcca
gcggattcacctgttgcaagtttaccaaaatgtgaattaacacctgctcagcgggtaggg
atacaatatggacaagcacaacgactgactggtggaattgagattggtgagtatcggatg
tattgcgaaggacgttttcttggagtaggagacttacgcgcagattctcatatttacgtt
aagcgtttagtgcataactaa
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