Brucella intermedia: IAR37_03380
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Entry
IAR37_03380 CDS
T06833
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
oin
Brucella intermedia
Pathway
oin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAR37_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oin03019
]
IAR37_03380
03009 Ribosome biogenesis [BR:
oin03009
]
IAR37_03380
Enzymes [BR:
oin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IAR37_03380
Messenger RNA biogenesis [BR:
oin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IAR37_03380
Ribosome biogenesis [BR:
oin03009
]
Prokaryotic type
rRNA helicases
IAR37_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QNQ40884
LinkDB
All DBs
Position
1:694080..696005
Genome browser
AA seq
641 aa
AA seq
DB search
MSLPETIAPALSGALAARGYNTLTAVQNAVLASETLDADLLVSAQTGSGKTVAFGLAMAN
TILEDELRFGDAGAPLAMIIAPTRELALQVRRELEWLYADTGARIASCVGGMDIRTERRA
LERGAHIVVGTPGRLRDHITRDALDMSELRAVVLDEADEMLDMGFREDLEFILGEAPEDR
RTLMFSATVPKPIAQLAKRFQNDALRLTVQSETSQHADIDYVAMPVPPHERDHAIINTLL
YYDSQNSIIFCSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPNNPETMLHRSGRTGRAGRKGTCVLVVPFSRRRTAERLL
HMAKLDAQTVPAPSIAAVQGKTNERILNAEVFNQPVEEEYQDLLKALTERYTPEQIASAF
LNREVASYPAAEEVSDAPVHPVGGKKPRDRFEKGERSDRGDRFERRDRGEPGERFDRNAQ
FDGVWFSVSAGRKHRADPKWLLPLICKAGDVSKRDVGSIKIFDNETRFEITASKADEFRR
SVEERGTGEKGLVIRTAVAGAGGDAAPREGKGGFKPRGEKFKEGGFRDGYKSDGYKGDRS
KGDKWDKPRDFSRGDDFKKDGFKKGGKKPEGGGYSKKRRGE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgcccgaaaccatcgctccggctctgtccggagcattagccgctcgcggttat
aatacgctcaccgccgttcaaaatgccgttctggcatccgaaacgctcgatgccgatctt
ctcgtttccgcacagaccggatcgggcaagacggtcgcattcggccttgcaatggccaat
accatcctcgaagacgaactgcgtttcggcgatgccggtgcgccgcttgccatgatcatc
gcgccgacgcgcgaactggcgcttcaggttcgccgtgagctggaatggctctatgccgat
accggcgcgcgcatcgcatcctgcgtcggcggcatggatatccgcaccgaacgccgtgcg
cttgaacgtggcgcccatatcgtcgtcggcacgccgggacgcctgcgcgaccatattacc
cgcgatgccctcgatatgtcggaactgcgcgcggttgttctcgatgaagccgacgaaatg
ctcgacatgggctttcgcgaggacctcgaattcatcctcggcgaagcgccggaagatcgc
cgcacgctgatgttctcggcaaccgtgccgaagccgattgcccagcttgccaagcgcttc
cagaacgacgcgcttcgtctcacggtccagagcgaaaccagccagcacgccgacatcgac
tatgtcgccatgccggtgccgccgcatgagcgcgatcacgcgatcatcaacacgctgctc
tattacgacagccagaactcgatcattttctgctcgacccgcgaagcggtgaagcacatg
gcaagccggctttccaatcgtggctttgcggtggtggcactgtcgggcgaattgagccag
gcagaacgcaacaatgcgcttcaggccatgcgcgatggccgcgcccgcgtctgcgttgca
accgacgttgccgcgcgcggtatcgatctgcccaatctcgacctcgtcatccacgccgat
ctgccgaacaatcctgaaacgatgctccaccgttcgggccgcaccggccgcgccggtcgc
aagggcacctgcgtgctggttgtgccgttctcgcgccgccgcacggccgagcgccttctg
cacatggcaaagctcgatgcgcagacggtccccgcgccaagcattgctgcggttcagggc
aagaccaatgagcgcatcctgaatgccgaagtcttcaaccagccggtcgaagaagaatat
caggatctcctgaaggcgctgaccgagcgttatacgcccgaacagattgcgagtgccttc
ctcaaccgcgaagtggcttcctaccccgcagccgaagaagtttccgacgcgccggtgcat
ccggttggcggcaagaagccccgggatcgttttgaaaaaggtgagcgttctgaccgtggc
gaccgcttcgagcgtcgtgatcgtggcgaaccgggcgaacgtttcgaccgcaatgctcag
tttgacggcgtgtggttctcggtttccgcaggtcgcaagcatcgcgccgatccgaaatgg
ctgctgccgctgatctgcaaggcgggcgatgtttccaagcgcgatgtcggatcgatcaag
attttcgacaatgaaacccgcttcgaaatcacagcctccaaggctgacgagttccgccgt
tcggtcgaagaacgcggcactggcgaaaagggtctcgtgatccgcaccgctgttgcaggt
gcaggcggcgacgctgccccgcgcgaaggcaagggcggtttcaagccgcgcggcgagaag
ttcaaggaaggcggcttccgcgacggctacaagagcgacggctacaaaggcgaccgctcg
aagggcgacaagtgggacaagccgcgcgatttctcccgtggagacgacttcaagaaagac
ggcttcaaaaagggcggtaaaaagcccgaaggcggcggttacagcaagaagcgccgcggc
gaataa
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