Brucella intermedia: IAR37_03535
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Entry
IAR37_03535 CDS
T06833
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
oin
Brucella intermedia
Pathway
oin02020
Two-component system
oin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
oin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IAR37_03535 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IAR37_03535 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oin03021
]
IAR37_03535 (rpoN)
Transcription machinery [BR:
oin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IAR37_03535 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Arg_repressor
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
QNQ40915
LinkDB
All DBs
Position
1:731496..733034
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AA seq
512 aa
AA seq
DB search
MALSPKLDFRQSQSLVMTPQLMQSIRLLQMTHVELEQFLDAEIEKNPLLDRIEAANDDFA
GSDSVRDDGEADEGEIESQASEDDWFKTEVSGDAESLSSTFDSSLENIFPDDPGRSDEIG
PDLAAQWKSAGGDGYVSASAYDIDQVTASRVSLGEHVAEQIALTFSATMDRFIATALADA
LDESGYLRVDIVGLAQNLGVETVEIERVLGVMQTFDPHGLFARDLRECLTIQLRLKDRFD
PAMEALIDNLDLLARRDFATLKKLCGVDQADILDMLTEIRMLDPKPGALFEISVADAIVP
DVLVTPSRDDGWAIELNAAAMPRLIVNNEYYAEVNASVKAEEKAFLSDCMQTANWLVRSL
DQRARTILKVTQEIVRQQDGFLRHGVTHLKPLNLRIVADAVGMHESTISRVTANKFMATP
RGVFELRYFFNASIASSEGGDAHSSESVRHRIRQMIDAEKPDDVLSDDAIVDALKKDGVD
IARRTVAKYRESMNIASSVQRRREKKARLSAS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcgcccaagctcgatttccgtcagtcgcaatcgctggtaatgactccccag
ttgatgcagtcgataagactgctgcaaatgacgcatgtggagctggagcagtttctcgac
gccgaaattgaaaaaaatccgcttctggaccgaatcgaggcagcaaatgatgattttgca
ggctcggattccgtccgcgacgatggagaagccgatgagggagagatagagtcccaagcg
tcggaggacgactggttcaagacggaagtctccggcgatgcggagagcctttcttccacc
ttcgacagttcgcttgagaacatctttcccgacgatccgggtcgctccgatgagatcggg
cctgaccttgccgcgcaatggaaatccgctggcggcgacggatatgtttcagccagcgct
tatgacatcgaccaggtcacggcgagccgggtttcgctgggcgagcatgtggcggaacag
atcgcgctgactttttccgcgacgatggaccggttcatcgcaaccgcgcttgccgacgcg
ctggacgagagcggctatctgcgtgtcgatattgtggggctcgcccagaacctgggcgtg
gaaacggtcgaaatcgagcgcgtgctcggtgtcatgcaaacctttgatccccatggcctt
ttcgctcgtgacctgcgggagtgcctgacgatacagttgcgtctcaaggatcggttcgat
ccggcgatggaagctttgatcgacaatctcgatcttctggcgcggcgcgacttcgcgacg
ctcaagaaactttgcggcgtcgatcaggccgacattctcgatatgctgaccgaaatccgc
atgctcgatccaaaaccgggcgcattgttcgagatttcggtcgccgatgccatcgtgccg
gacgtgctggtgacgccgtcgcgcgatgacggctgggccatcgagttgaatgccgcggcc
atgccgcgcctcatcgtcaacaatgaatattatgccgaggtgaacgcctcggtgaaagcc
gaggaaaaggcgtttctctcggactgcatgcagactgcgaactggctcgtgcgcagcctt
gaccagcgcgcccgcactatcctgaaggtcacgcaggaaatcgtgcggcagcaggacggt
tttctgcgccacggagtgacccatttgaagccgctcaacctccgcattgtcgcggatgcg
gtcggcatgcatgaatccaccatcagccgggtgaccgcgaacaagttcatggcgacgcca
cgcggcgtgtttgaattgcgctatttcttcaatgcttccatcgcctcgtccgagggaggc
gacgcgcattcatccgaaagtgtgcgccatcgcatccgccagatgattgacgccgaaaag
cctgacgacgtgctttccgatgacgccatcgtggatgccctcaagaaggacggtgtggat
attgcgcgaagaacggtcgcaaaataccgggaatcgatgaatattgcctcatcggtacaa
cgcaggcgggaaaagaaggcgagattgtcggcttcctga
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