Brucella intermedia: IAR37_10065
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Entry
IAR37_10065 CDS
T06833
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
oin
Brucella intermedia
Pathway
oin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAR37_10065 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oin03021
]
IAR37_10065 (rpoC)
03400 DNA repair and recombination proteins [BR:
oin03400
]
IAR37_10065 (rpoC)
Enzymes [BR:
oin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAR37_10065 (rpoC)
Transcription machinery [BR:
oin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAR37_10065 (rpoC)
DNA repair and recombination proteins [BR:
oin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAR37_10065 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
QNQ39702
LinkDB
All DBs
Position
1:complement(2026903..2031105)
Genome browser
AA seq
1400 aa
AA seq
DB search
MNQEVMNLFNPQAPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTSLKEHQLLSEEEYMIAVDEFGEDQFTA
LIGAEAIYELLASMELEKIAADLRVELAETTSDLKQKKLMKRLKIVENFLESGNRPEWMI
MKIVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSIVAEKEPGEGMMFADMGELQHALE
NKVVTLHTKIKGRFKTVDAEGKPVSKIYDTTPGRMIIGELLPKNVMVPFDICNQEMTKKN
ISKMIDHVYRHCGQKETVIFCDRIMQLGFAHACRAGISFGKDDMVIPDTKAKIVADTEAL
TTEYEQQYNDGLITQGEKYNKVVDAWGKATDKITEEMMARLKAVEFDPVTGRQKQMNSVY
MMSHSGARGSVNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDAIISEVDCGAEIGLTMQPIVDAGQIVASIGQRVLGRT
ALDPILHPATGEVIVEAGRMIEEKDVEIIEKAGIQSIRIRSALTCETRNGVCAKCYGRDL
ARGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHLGGTAQVVDSSYLEASYEGTVKLRNRN
VVRNSDGNLVVMGRNMAVLILDATGKERAVHRVTYGSRLFVDEGDTVKRGQRIAEWDPYT
RPIMTEVEGYVEFEDLVDGLSVSETADESTGITKRVVIDWRSTPRGSDLKPAMVIKDKAG
KILKLSKGGDARFLLSVESILSVEPGAHVKAGDVIARLPMESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTVRFGRDYKNKRRIIIEPNDDTIAPVEYLIPKGKPFHLQDGDVIE
KGEYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVE
ITESGDTGYIPGDHVDRIELEEINERLIEEGKKPGSGNPVLLGITKASLQTPSFISAASF
QETTRVLTEAAVAGKMDTLQGLKENVIVGRLIPAGTGGMTNQIRRIATARDDLIIDERRK
SSGSAEANAMLVDMTNNAAE
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatcctcaggctccggcacaaacgttcgattcc
atcagaatctcgattgccagccctgagaagattctgtcctggtcatacggcgagatcaag
aagccggagacgatcaactaccgtacgttcaagcctgaacgcgatggtctcttctgcgcg
cgcatcttcggcccgatcaaggactatgaatgcttgtgcggcaagtacaagcgtatgaaa
tacaagggcatcatctgcgaaaagtgcggcgtggaagttacgctctcgcgcgttcgtcgc
gagcgcatgggccacatcgaactcgcggccccggttgcccatatctggttcctgaagtcg
ctgccgagccgtatcggcacgctcctggacatgacgctcaaggatatcgagcgcgtcctg
tacttcgagaactacatcgttaccgaaccgggcctgacctcgctgaaggagcaccagctt
ctttcggaagaggaatatatgattgccgtcgatgaattcggcgaagatcagttcacggcc
ctcattggtgctgaagctatctacgagcttctggcttcgatggaactcgaaaagatcgcc
gccgatctgcgcgtcgagcttgccgagaccacttcggacctgaagcagaagaagctgatg
aagcgtctgaagatcgtcgaaaacttcctggagtcgggaaaccgtccggaatggatgatc
atgaagatcgttccggtcattccgccggacctgcgtccgctcgtgccgctggacggcggt
cgtttcgcgacgtcggatctgaacgatctctatcgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgaactgcgcgcaccgggcatcatcatccgcaacgaaaagcgcatg
ctgcaggaagctgtggacgcgctgttcgacaacggtcgtcgtggccgcgtcatcaccggt
gccaacaagcgcccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgctcggtcatcgtgaccggt
ccggaactgaagctgcaccagtgcggtttgccgaagaagatggcgctcgaactgttcaag
ccattcatctacgcacgtcttgacgccaagggttattcctcgaccgtcaagcaggccaag
aagctggttgaaaaggaacgtccggaagtctgggatatccttgacgaagtgatccgtgag
catccggttctcctgaaccgtgcgccgacgctgcaccgtcttgggattcaggcttttgaa
cccaccctgatcgaaggcaaggccatccagctgcatccgctcgtctgtaccgcgttcaac
gccgacttcgacggtgaccagatggctgttcacgttccgctgtcgcttgaagcccagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcatccggctaacggcgcaccg
atcatcgttccttcgcaggacatggttctcggcctctattatctgtccatcgtggcggag
aaggagccgggcgagggcatgatgttcgccgatatgggcgaactgcagcatgcgcttgaa
aacaaggtcgtcacgctgcacaccaagatcaagggccgcttcaagacggtcgacgccgaa
ggcaagccagtgtcgaagatctacgacacgacgcctggccgcatgatcattggcgagctt
ctgccgaagaacgtcatggtgccgttcgacatctgcaatcaggagatgaccaagaagaac
atctccaagatgatcgaccacgtctaccgccattgcggtcagaaagagacggtcatcttc
tgcgatcgcatcatgcagctcggcttcgctcatgcctgccgtgcaggcatctccttcggc
aaggatgacatggttatcccggacacgaaggcgaagatcgttgccgacaccgaagcgctc
acgaccgaatacgaacagcagtacaatgacggcctgatcactcagggcgaaaagtacaac
aaggtcgttgacgcctggggcaaggctaccgacaagatcaccgaagagatgatggcgcgc
ctgaaggccgtcgaattcgatccggtgaccggtcgccagaagcagatgaactcggtctac
atgatgtcgcattcgggtgcccgtggttcggtcaaccagatgcgtcagcttggcggcatg
cgtggcctgatggccaagccgtcgggtgaaatcatcgaaaccccgatcatctcgaacttc
aaggaaggcctgaccgttaacgagtacttcaactcgacccacggtgcccgtaagggtctg
gcagacaccgccttgaagacggctaactcgggctacctgacccgccgtctcgttgacgtt
gcacaggatgcgatcatttcggaagtcgattgcggtgccgaaatcggtctcaccatgcag
ccgatcgtcgatgccggtcagatcgttgcctcgatcggccagcgcgttctgggccgtacg
gctctcgatccgatcctgcatccggcaaccggcgaagtcatcgtcgaagctggccgcatg
atcgaggaaaaggacgtcgagatcatcgagaaggctggtatccagtcgatccgcatccgt
tcggccctgacctgcgaaacccgcaacggcgtctgcgccaagtgctatggtcgcgacctt
gcacgcggtactccggtcaaccagggcgaagcggtcggcgttatcgctgcccagtcgatc
ggcgagccgggcacccagctcaccatgcgtaccttccacttgggcggtactgcacaggtg
gttgacagctcgtatctcgaagcttcgtacgaaggcactgtcaagctgcgtaaccgcaat
gtggttcgcaactccgatggcaacctcgtggtgatgggccgtaacatggctgtcctgatc
ctcgacgcaacgggcaaggaacgtgcggtccaccgcgtgacctacggttcgcgcctgttc
gtggacgagggcgatacggttaagcgcggccagcgtattgctgagtgggacccgtatacc
cgtccaatcatgaccgaagttgaaggctacgttgagttcgaagatctcgtcgatggtctc
tcggtttcggaaacggctgacgagtcgaccggtatcacgaagcgcgtcgtcatcgactgg
cgttcgacgcctcgcggttcggacctcaagcctgccatggtcatcaaggacaaggccggc
aagatcctgaagctgtcgaagggtggcgatgcccgcttcctgctctccgtggaatcgatc
ctttcggtcgagcccggcgcgcatgtgaaggctggtgacgttatcgcccgtctgccgatg
gaaagcgccaagaccaaggacatcaccggcggtctgccgcgtgtggccgaactgttcgaa
gcacgtcgtccgaaggaccatgccatcatcgccgagatcgatggtaccgtccgcttcggt
cgcgactacaagaacaagcgtcgcatcatcatcgagccgaacgacgacacgatcgcgccg
gtcgagtacctcattccgaagggcaagccgttccatcttcaggacggcgacgtcatcgaa
aagggtgagtacatcctcgacggcaacccggcaccgcatgacattctggcgatcaagggc
gtcgaagctctggcttcgtacctcgtgaacgaaatccaggaagtctatcgtctgcagggc
gttttgatcaacgacaagcacatcgaagtgattgtccggcagatgctgcagaaggtggaa
atcacggaatccggcgataccggctacattccgggcgaccacgtcgaccgcatcgagctg
gaagagatcaacgagcgtcttatcgaagagggcaagaagccgggctctggcaaccctgtt
ctgctcggtatcaccaaggcttcgctgcagacgccttcgttcatctcggctgcgtcgttc
caggaaacgacccgcgtcctcaccgaggctgcggtggccggcaagatggacacgctgcag
ggtctcaaggaaaacgtcatcgttggccgtctcattccggccggtactggcggcatgacc
aaccagatccgtcgcatcgcaaccgctcgcgacgatctgatcatcgacgagcgccgcaag
tcttccggttccgcggaagccaatgcgatgctggtggacatgaccaacaacgccgccgaa
taa
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