Oxyura jamaicensis (ruddy duck): 118155444
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Entry
118155444 CDS
T11549
Symbol
SLC27A1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03320
PPAR signaling pathway
oja04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118155444 (SLC27A1)
09158 Development and regeneration
04382 Cornified envelope formation
118155444 (SLC27A1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oja01004
]
118155444 (SLC27A1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oja02000
]
118155444 (SLC27A1)
Lipid biosynthesis proteins [BR:
oja01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
118155444 (SLC27A1)
Transporters [BR:
oja02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
118155444 (SLC27A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
118155444
NCBI-ProteinID:
XP_035164598
LinkDB
All DBs
Position
30:complement(join(117272..117429,118176..118322,119178..119342,119750..119887,120141..120267,120397..120606,121606..121715,121823..121914,122017..122086,123039..123200,123751..124145,126322..126488))
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AA seq
646 aa
AA seq
DB search
MQPVGVCTASLGSLGLMRFFGVPWSWSLAATLGICLGSGGWRLLRVLCKTALRDLFGLSV
LLRVKYKLRRHQRAKSTIPKMFQDVVRRHPDKVALIYEATGEKWTFRGLDEYSNAVANYF
YQQGFRLGDVIAIFMESRPEFVGLWLGMAKVGIEAALINFNLRLDSLVYCVTTSGAKAVI
FGGELSSAISEVNGMLGKNMAKFCSGDYNPEVVPAETRHLDPLLSTASKSPPAQIPVKGL
DDRLFYIYTSGTTGMPKAAIVVHSRYYRIAAFGYYAYKMQPEDIVYNCLPLYHSAGNIMG
VGQCLIHGLTVVIRKKFSASRFWDDCTKYRCTIIQYIGEICRYLLNQPVRESETQHCVRL
AVGNGLRPTIWEDFTKRFRIKQIGEFYGATECNCSIANLDGKVGACGFNSRILPNVYPIR
LVKVNEDTMELIRDSRGLCIPCRPGEPGLLVGQINQQDPLRRFDGYVNENATHKKIAYNV
LQKGDQAYLTGDVLVMDELGYMYFKDRSGDTFRWRGENVSTTEVEGMLSHILNQTDVAVY
GVEVPGVEGKAGMAAIADPKTKVNPNVLYQELQKVLPPYARPIFLRLLPQVDTTGTFKIQ
KTRLQREGFDPHQTSDRLYFLDLKLGKYVPLDECLYERICSGKAAL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggtgggggtctgcacggcctccctgggctccctggggctgatgaggttcttc
ggggtgccctggtcgtggagcctcgccgccacgctgggcatctgcctgggcagcggagga
tggaggctgctgcgcgtcctctgcaagacggcgctgagggacctcttcggcctctcggtg
ctgttacgagtcaaatacaagctacgaaggcatcaaagggccaaaagcacaattcccaag
atgttccaggacgtcgtccgcaggcaccccgacaaagtggccctgatttacgaggccacc
ggtgaaaagtggaccttcagggggctggacgagtactccaacgccgtggccaactacttc
taccagcagggcttccgcctgggggacgtcatcgccatcttcatggagagccgccccgag
ttcgtgggcctctggctggggatggcgaaggttggcatcgaggcggccctcatcaacttc
aacttgcgcttggattccctggtttactgcgtgacgacctcgggtgcgaaagccgtgatc
ttcggaggagagctgtcttcagcaatatccgaggtgaatgggatgctggggaagaacatg
gcaaaattctgctcgggtgactacaacccagaggttgttccggcggagacccgacatctc
gatcctcttctgagcactgcatccaaatcgcccccagctcagatccccgtcaaaggttta
gatgaccggctcttttacatctacacttcgggcaccacggggatgcccaaggctgccatc
gtggtgcacagcaggtattatcgcatcgccgccttcggctactacgcctacaaaatgcaa
ccggaggacatcgtctacaactgcctcccgctctaccactctgcaggtaacatcatggga
gtcggccagtgcctcatccacggcctgacggtggtgatcaggaagaagttctcggccagt
cgcttctgggatgactgcaccaagtacagatgcacgattattcagtatatcggggaaatc
tgcaggtatctcctgaatcagccggtccgggagtcagaaacccagcactgcgtgcggctg
gcagtgggcaatggtttgagacccaccatatgggaggacttcacgaagcgcttccgcatc
aagcagatcggagagttctacggagccacggagtgcaactgcagcattgcaaacctggac
ggaaaggtcggtgcctgcggcttcaacagccggattttgcccaatgtttatcccattcgt
ttggtgaaggtgaacgaggacacgatggagctgatccgtgattccagggggctctgcatc
ccctgtcgcccaggagagccaggattgcttgtggggcagataaaccaacaggatcccctg
cgccggttcgacggctacgtcaacgagaatgccacccacaagaagattgcttacaacgtg
ctgcagaagggggaccaggcataccttacaggagatgtgctggtgatggatgagctcggc
tacatgtacttcaaagaccgcagcggtgacaccttccgatggcgaggagagaacgtctcc
accacagaagtggaagggatgttgagtcacatcctcaaccagacagacgttgcagtgtac
ggagtggaggtaccaggggtggaaggaaaagcaggaatggcagcaatcgcagatcctaaa
actaaggtgaaccccaacgttctgtaccaggagctacagaaggtgctgcctccttacgcc
cggcccatctttcttcgtctcttaccccaggttgacaccacaggtacttttaagattcag
aaaacccgcttgcagagggaaggatttgacccccaccaaacgtcagaccggttgtatttt
ctggatctaaagctggggaaatacgttcctctggatgaatgcctttatgaaaggatttgt
tctggaaaagccgctttatga
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