Oxyura jamaicensis (ruddy duck): 118155895
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Entry
118155895 CDS
T11549
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
oja
Oxyura jamaicensis (ruddy duck)
Pathway
oja04137
Mitophagy - animal
oja04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118155895 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118155895 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oja03019
]
118155895 (VCP)
03009 Ribosome biogenesis [BR:
oja03009
]
118155895 (VCP)
04131 Membrane trafficking [BR:
oja04131
]
118155895 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oja04147
]
118155895 (VCP)
Messenger RNA biogenesis [BR:
oja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118155895 (VCP)
Ribosome biogenesis [BR:
oja03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
118155895 (VCP)
Membrane trafficking [BR:
oja04131
]
SNARE
SNARE associated proteins
Others
118155895 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
118155895 (VCP)
Exosome [BR:
oja04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118155895 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
118155895
NCBI-ProteinID:
XP_035165418
LinkDB
All DBs
Position
Z:complement(10012290..10034436)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggatccgattctaaagcagatgacttgtcgactgcaattctgaagcagaag
aacaggcccaatcggttaattgttgatgaagccatcaatgaagacaacagtgttgtgtca
ctatcccaggcaaaaatggatgagttgcaactgttcagaggagatactgttctgctaaaa
ggaaagaagaggagagaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaacagggttgttcgcaataacctgagagtgcgcctgggtgatgtgatc
agcatccagccctgcccagatgtgaaatacggcaaacgtatccatgtgctgccaattgat
gacacagtagaagggatcacaggaaatctgtttgaggtctatctcaagccatacttcctg
gaggcatacagacccatcaggaaaggtgacatcttcttggtgcgtggaggaatgcgtgcg
gtggaattcaaagtggtggagacagatccaagtccctactgcatagtagctccggacaca
gtgatccattgtgaaggagagcccatcaaacgagaggatgaagaggagtcactgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcagatcaaagagatggtg
gaacttcccctccgacacccagcactcttcaaggccataggggtgaagcctccacgtggc
atcctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaac
gaaactggagccttcttcttcctgattaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcatttgaagaagcagaaaagaacgctcctgccatc
atcttcattgatgaactggatgccattgctcctaagagagagaagacgcatggagaggtg
gaacgtcgcatagtgtctcagctgttgactcttatggatggactgaaacagagagcacat
gtgattgttatggcagctaccaacagacctaacagcattgacccagcactcaggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgcaactgggcgcctggagatc
ctgcagatccacacaaaaaatatgaaactggctgatgatgtggatctggaacaggtggca
aacgagacccatggacatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaagatgaaaccattgatgctgaa
gtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccagagtaac
ccttctgctcttcgggagactgtggtagaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggagcttgtacaatatcctgtggagcaccca
gacaagttcctcaaatttggcatgactccatcaaaaggggttctgttctatgggccacct
ggttgtggtaagacacttctggccaaagccattgccaatgaatgccaggcaaacttcatt
tccatcaagggcccagaattgctcaccatgtggtttggagagtctgaagccaacgtgcgt
gagatctttgacaaggcccgccaagcagccccttgtgtgctcttctttgatgagctggac
tccatcgcaaaggctcgaggtgggaatatcggagatggtggcggtgccgcagaccgtgtc
atcaaccagatcctgacagagatggacggcatgtccaccaagaagaacgtcttcatcatc
ggtgccaccaacaggccggacatcatcgacccagccatcttgcgccctggccgcctggat
caactcatctacatccccctgcctgacgagaagtcccgggtcgctattcttaaggccaac
ctgaggaaatcaccagttgctaaggatgttgacctggatttcctagctaagatgaccaac
ggcttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgc
gagtccatcgagagtgagatcaggcgagagcgtgagaggcagaccaacccttccgccatg
gaggtggaggaggacgacccggttcctgagatacgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgacaatgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggctttggcagcttcaggttcccatcaggaaaccagggaggc
gctggtccaagccaaggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaat
gacgacgatctctacggttaa
DBGET
integrated database retrieval system
