KEGG   Oxyura jamaicensis (ruddy duck): 118155903
Entry
118155903         CDS       T11549                                 
Symbol
WDR70
Name
(RefSeq) WD repeat-containing protein 70
  KO
K24752  WD repeat-containing protein 70
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oja04121]
    118155903 (WDR70)
   03036 Chromosome and associated proteins [BR:oja03036]
    118155903 (WDR70)
   03400 DNA repair and recombination proteins [BR:oja03400]
    118155903 (WDR70)
Ubiquitin system [BR:oja04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118155903 (WDR70)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Histone modification proteins
   Other histone modification proteins
    118155903 (WDR70)
DNA repair and recombination proteins [BR:oja03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     118155903 (WDR70)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_EML_2 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_EML EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_CAF1B_HIR1 CFAP251_N WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR75_2nd Ge1_WD40 Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_SCAP SBP56 DUF2201_N
Other DBs
NCBI-GeneID: 118155903
NCBI-ProteinID: XP_035165433
LinkDB
Position
Z:join(13084661..13084679,13084765..13084827,13085056..13085139,13087476..13087590,13092707..13092896,13121666..13121725,13126242..13126375,13130636..13130789,13133027..13133103,13163619..13163793,13186705..13186804,13192547..13192631,13193770..13193908,13211095..13211195,13212599..13212678,13215581..13215697,13216059..13216221,13223826..13223910)
AA seq 646 aa
MEQAEGDAEMLAGADPELAATMGFSGFGKKARTFDLEAMFEQTRRTAVERSRKVLEARER
EKEEQAEKELKSQHTESLASASSATGVRSTLKPRDTASSESEDSSDEELTGPSMQSQTSV
QGPVGGGDDDDDEEFIGPPLPPGFKDSDDDDTEEEDNNPVKKIPDSHEITLQHGTKTVSA
LGLDPSGARLITGGYDYDVKFWDFAGMDASLQAFRSLQPCECHQIKSLQYSSTGDVILVV
SGNSQAKVLDRDGFPVMECIKGDQYIVDMTNTKGHTAMLNSGCWHPKIKEEFLTCSNDGT
VRTWDVNNEKKHKNVFKPRSVQGKRVIPTTCTYSRDGKLIAAGCQDGSIQIWDRNMTVHT
KFHCRQAHAPGTDTSCLAFSYDGTALASRGGDDTLKMWDIRQFKKPLHSAERLSSFFPMT
DCCFSPDDKILVTGTSVKKGGGSGKLFFFDRETFQKLYEIEVTDASVVRCLWHPKLNQIM
VGTGNGLAKVYYDPVKSQRGAKLCVVKTKRKERQAETLTQDYIITPHALPMFREPRQRST
RKQLEKDRLDPMKSHKPEPPVAGPGRGGRVGTHGGTLSSYIVKNIALDKTDDSNPREAIL
RHAKEAEENPYWVAPAYAKTQPKTVFAEVEPEDDETDKPEWKKRKI
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggagcaggcggagggcgacgccgagatgctggcgggagccgacccggagctggcggcc
accatgggcttctccggcttcgggaagaaagctcgcacttttgacctcgaagccatgttc
gagcagacaaggaggactgccgtggaaaggagcaggaaggtcttagaggctcgagaaaga
gaaaaggaagaacaggctgaaaaagaacttaaaagtcaacacactgaatcattggcttca
gcctcaagtgcaacaggagttcggtccacattaaaaccaagagacacagctagtagtgaa
agtgaagacagctcagatgaagagttaactggtccttccatgcaatcccagacttctgtt
caaggtccagttggtggtggtgatgatgacgatgatgaagaattcattggaccaccgctt
ccacctgggttcaaggatagtgatgatgatgatacagaagaggaagataataaccctgtc
aagaaaattccagattctcatgaaattacactccaacatgggacaaaaacagtttctgct
ttgggattggatccttcaggtgcccgtttgataactggtggatatgactacgacgttaaa
ttttgggattttgctggaatggatgcttctctccaggcttttcggtcactccagccttgt
gaatgtcaccaaatcaagtctttacagtacagcagcacaggagatgtcattctggttgtc
tctggtaactctcaggcaaaggtgcttgacagagatggtttcccagtaatggaatgcata
aaaggagaccaatacattgtggatatgacaaacaccaagggtcatacagcaatgcttaat
tcaggctgttggcatccaaaaataaaggaagaatttctgacatgttctaatgatggaact
gtgagaacatgggatgttaacaatgagaaaaaacacaagaacgtatttaagccacgatca
gttcaaggtaaacgggtcattcctacaacttgtacgtacagcagagatggtaaacttatt
gcagctggctgtcaagatggctccatccagatctgggataggaatatgactgtacatacg
aagttccactgcaggcaagcccatgctccaggcactgacacttcttgcttggcattttcc
tatgatggtactgcccttgcgagtcggggaggggatgatactttaaagatgtgggatata
agacaatttaaaaagcctcttcattcagctgaaagactgtccagcttctttccaatgact
gattgctgttttagcccagatgataaaatacttgtcacaggaacctctgttaagaaaggt
ggtggcagtgggaagctgttcttcttcgatcgggagacatttcagaagttgtacgagata
gaagttacagatgcgagtgttgtgcgttgcctttggcatcccaagctgaatcagatcatg
gttggtacaggaaatggactggcaaaagtgtactatgatcctgttaaaagccagagggga
gcaaaattatgcgtggtcaaaacaaaaagaaaagagagacaagcagagactcttactcag
gattacattataacaccccatgcacttcccatgttccgtgaaccacgacagcgaagcacc
aggaaacagctggaaaaggataggctggaccccatgaagtctcacaaacctgaacctcca
gtagcaggaccaggtcgtggtggccgtgttggaacacatggaggtaccttgtcatcatac
atagtcaagaatattgctctggataagacagatgatagcaaccctcgagaggctatttta
cgtcatgcaaaggaagcagaggagaatccatactgggttgctccagcatatgctaaaaca
cagccaaaaacagtttttgcagaagtggaaccagaagatgatgaaacagacaagccagaa
tggaaaaaacgtaaaatttga

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