KEGG   Oxyura jamaicensis (ruddy duck): 118155928
Entry
118155928         CDS       T11549                                 
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oja04121]
    118155928 (RNF20)
Enzymes [BR:oja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118155928 (RNF20)
Ubiquitin system [BR:oja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    118155928 (RNF20)
SSDB
Motif
Pfam: BRE1B CC_Bre1 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_2 BRE1 zf-RING_UBOX zf-rbx1
Other DBs
NCBI-GeneID: 118155928
NCBI-ProteinID: XP_035165487
LinkDB
Position
Z:complement(join(73159505..73159681,73159912..73160013,73160382..73160522,73161619..73161744,73162002..73162214,73163149..73163298,73165367..73165484,73166080..73166477,73167470..73167591,73168816..73168951,73169144..73169323,73171084..73171203,73171494..73171571,73171762..73171908,73172830..73172948,73174132..73174314,73174473..73174620,73174728..73174895,73175045..73175173))
AA seq 984 aa
MSGIGNKRAAGDPGPSAPPEKKAGVEDSGTTVETIKLGGVSSTEEMDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIINRYWNQFDENIRIILKRFDLDQGLGDL
LSERKALVVPEPEPDSDSNQERKDERERGEGLEPAFSFLATLASSTSEEIESQLQERVES
SRRAVAQIVTMYDKLQEKVDVLSHKLNSGDITLMEEAVLELNSYLSHENGRLQELADLLQ
EKHRIMSQEFSKLQERVETAESRVSVLETMIDDLQWNIDKIRKREQRLNRHLADVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRLNELEELRQDLAEVTTQN
EKLKVELRRAVEEAVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRTTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLSKIRSRSSSTILQSQSSTEDTKEEPSEIKQEP
DDPSAQVPVPKAASEDASEVKARRDEEERERERREREREREKEKEKEREREKEKEKEKER
EREKQKQKESEKERESKEKEKGKHEDGRKKEAEVIKQLKAELKKAQESQKEMKLLLDMYR
SAPKEQRDKVQLMAAEKKAKAELEELRQRVKELEDKEKKESKKMADEDALRKIRAVEEQI
EYLQKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSN
QIHKLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSSIGTGEKELGLRTQALE
MNKRKAMDAAQLADDLKTQLELAQKKLHDFQDEIVENRVTREKEMFNFKRAEEDISRLRR
KLETTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYD
TRQRKCPKCNAAFGANDFHRIYIG
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgtctggaattggcaataaaagggcagctggagaccctggcccttctgcacctccagag
aagaaggccggggttgaagactcaggtaccacagtggagaccattaaacttggtggcgtt
tcttcaacggaggagatggacattcggaccctgcagaccaagaaccggaaactagcagag
atgctcgaccagcggcaagccattgaggatgagctgcgggagcacatagagaagctggag
cgtcggcaggccactgatgatgcttctctgctgatcatcaatcgttactggaatcagttt
gacgaaaacatccgcatcatacttaaacgctttgacctggaccaaggtcttggagatctt
ctgtctgaaagaaaagcactggtggtaccagaacctgaaccagactcagacagtaatcag
gagcgcaaagatgagagagagcgaggtgaaggactggagccagcattctccttcctagcc
accctagccagcagcactagtgaggagatagagtctcagctgcaagagcgtgtagagtcc
tcccggcgtgctgttgcccagattgtcacaatgtatgacaagctgcaggaaaaagtggat
gtgctgtcccacaagctgaatagtggagatattacattgatggaagaagcagtcctggag
cttaattcttacctgtcacatgaaaatggacggctgcaggagctggctgatcttctacag
gaaaaacatcgaatcatgtctcaagagttctccaagctgcaagagagagtggagacagca
gagtctcgtgtgtctgttctggagaccatgattgatgaccttcagtggaatattgacaag
atccgcaagagagagcagcgtcttaaccgacacttagcagatgtacttgaacgggtaaat
tccaaaggctacaaggtgtatggagctgggagcagtctctatggaggcacaatcaccatt
aatgcccgcaagtttgaggagatgaatgcagaactggaagagaataaagagcttgctggg
aaccgcctcaatgagttggaggaactgcgccaggatcttgcggaagtaacaacacagaat
gaaaaacttaaggttgagctgcgacgagcagtggaagaggctgtgaaggagactccagaa
taccgctgcatgcagtcccaattttctgttttgtataatgagagtctccagctgaaggca
catcttgatgaggcccgcactctgcttcatggcacacgcaccacacaccagcgtcaggtg
gaactaatcgagagggatgaggtcagccttcacaagaaactacgcacagaagtgattcag
ctagaggacactctagcacaagtccgcaaagagtatgagatgctgaggattgagtttgaa
cagacacttgctgccaatgaacaagcaggtccaattaatcgagagatgcgtcatctcatc
agcagcctccaaaatcacaaccaccagctgaagggagaggtgttgagatacaagcgcaaa
ctgagagaggcccaatctgacttgagcaagatccgttctcgcagtagtagtactatctta
cagtcccagtccagcactgaagacacaaaggaggagccttcagagatcaaacaggagcca
gacgatccttctgcccaagtacctgtgcccaaggctgcttctgaagatgctagtgaagtt
aaggccaggcgagatgaagaggaacgggagcgggaaagacgtgagagggagagggaacga
gagaaggaaaaggagaaagagagggagcgagagaaagagaaagaaaaggaaaaggagcgg
gagcgggaaaaacagaagcagaaggaatctgagaaggaaagagagtccaaagagaaggag
aaagggaaacatgaagatggaagaaagaaggaggctgaagtgattaagcagctgaaggct
gagctcaagaaggcccaggagagccagaaggagatgaagctgttgttagatatgtaccgc
tctgcccccaaagaacagagagacaaagtgcagctgatggcagctgagaagaaagcaaag
gctgagctggaagaactaaggcagagggtgaaagaattggaagacaaggagaaaaaggag
agtaaaaagatggctgatgaggatgcccttcggaagatccgagcagtagaagaacagatt
gagtatttacagaagaaactagccatggctaaacaggaagaggaggctctgctgtcagaa
atggatgtcacaggccaagcctttgaagacatgcaggagcagaacatccgcctgatgcag
cagctgcgggagaaggatgatgccaacttcaagctgatgtcagaacgcatcaagtccaac
cagatccataagctgctgaaagaggagaaggaggagctggcagaccaagttttaacactg
aagacacaggtggatgcccagctgcaagttgtacgtaaactggaggagaaggaacactta
ctgcaaagcagtattggaactggggagaaagagctaggtctccgaacacaggctctggaa
atgaacaaacggaaggccatggatgcagcccagcttgcagatgacctcaaaacccagcta
gagctggctcagaagaagttacatgacttccaggatgagatagtggaaaacagagtaact
agagaaaaagagatgttcaacttcaaaagggctgaggaagacatttctaggttacgcagg
aagctggagaccactaagaagcctgacatggttcccaactgtgatgagatattgatggaa
gaaatcaaggattacaaggcccgcctgacctgcccgtgctgtaacatgcgcaaaaaggat
gctgtcctcacaaagtgttttcacgtcttctgctttgagtgtgtgaaaacacgctatgac
acccggcagcgtaagtgcccgaagtgcaatgctgcctttggagccaatgacttccacagg
atctacatcggttga

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