Oxyura jamaicensis (ruddy duck): 118156229
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Entry
118156229 CDS
T11549
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
oja Oxyura jamaicensis (ruddy duck)
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GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
118156229
NCBI-ProteinID:
XP_035165998
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Position
Z:complement(join(64495413..64495497,64500049..64500119,64501835..64502897,64505388..64505480,64512683..64512852,64516302..64516427,64520850..64520963,64523561..64523740,64525459..64526321,64541128..64541200,64548352..64548408))
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AA seq
964 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSITSLKTIPELCRRCDSQNEDRSVSSSSWNCGVSTLIGNA
QKPTGIADVCNKFRPVKRVSPLKHQPESSENNESDDQKNQKGEYQKDSESQPAPPNDDQN
PGEGENLKSKNIEPTVLLGELEHYDLDMDEILDVPYIKSSQQLVPFTKVAPEKKILGVCS
TVNGVSGKTCPTGSTDNSPSGVTQFCVLSPVKGSQLRKTQPIVLDQHKHITEELELSQPL
VKCSSVHESEAQGKGFLCRTFVDPQAHKTEKTMPNCHLRTFHLQTAVAENKQLEELSMNW
SSAGSPEERSEEVKKFKSILNIVKEGQISLLPHLAADNLDKIHDECDNNLLHVAASKGHA
ECLQHLTSLMGEDCLNERNIEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPSL
IHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNTAVHIAAQHGYLGCIQTLVEYGANV
TMQNHVGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQL
QQLLEAQRSEGKALPMSSSSPSSPASGKPQWKPSEVDELSPPKSKLNTQDGIQILGSLGT
SSRTRAKIKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDAHASSKNVKKILPEKRELK
LARLRQLMQRSLSESDTDSANSEDHKNTPVKRTDKPRPQPIVESVESTESLHLMIKKHTS
AAGRRFPFGTRASKSVDGHSPSPTSESSDPDNEAQYQSGTVPQSQFCGDSSPSSTDSATA
QKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQVELAESELNEEKDKDRGKALLRAP
PSTGEPAGDQLKRPFGTFRSIMETLSGNQNNNNNCQTANLIKTSSTLPFTSLGRKTADSK
GNPAALTKGRNKPGPYCSHTSFSSSTLNEEHLCNYAWHDDISKKSQKSYSQKSSEEPELQ
EFFL
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaatagattttagtgatgatatatcatat
tctataacttctctcaagaccatcccagaattatgtagaaggtgtgattcacaaaatgaa
gacagatcagtttccagcagcagctggaactgtggagtctcaactcttatcggaaatgca
cagaaaccaacaggcattgcagatgtgtgcaataaattcagaccagtgaagagggtttcc
ccactaaagcaccagccagagagctctgagaacaatgaaagcgatgaccaaaagaaccag
aagggagaataccagaaagacagcgaatcacagcctgcacctccaaatgatgaccagaac
ccaggagaaggggagaaccttaaaagtaaaaacattgagcctactgttctgctcggggag
ctggagcactatgacctggatatggatgaaattttggatgtgccttatattaaatcaagc
cagcaactcgttcctttcacaaaggtagctcctgagaaaaaaattttgggtgtatgttca
acagtcaatggtgttagtggcaagacctgccctacagggagcacagacaactcgccttct
ggggtaacacagttctgtgttctctctcctgtgaaaggctctcagctgagaaaaacgcag
cccattgtccttgatcagcacaagcatataacagaagaattagagctttcccagccttta
gttaagtgtagctcagtccatgaatctgaagcccagggcaagggtttcctctgtaggaca
tttgttgatcctcaggcacacaaaactgagaagactatgccaaactgccacctgaggact
tttcacctgcagacagcagtggcagaaaacaagcaactggaggaactgagtatgaactgg
agcagtgcagggagcccagaagaaaggagtgaagaggtgaaaaaatttaagagcatctta
aacattgtaaaggaaggccaaatatcgttactgccacatttagcagcagataatttggat
aagattcatgatgaatgtgacaacaatctgttgcatgtagcagcatcaaagggacatgca
gaatgcctgcagcatctcacttctttgatgggcgaagactgtttgaatgaaagaaacatt
gagcagctaactccagctggattagcaataaagaatggtcagctggaatgtgttcggtgg
atggtgagcgaaacagaagctattgcagaattaagttgttccaaagatcatccgagcctt
attcattatgcaggttgctatggtcaggagaaaatacttctgtggcttcttcagtttatg
caagaacaagggatttcactggatgaagttgaccaagatggaaatactgctgttcatata
gctgctcaacatggctatctaggatgcatacagacattggttgaatatggagcaaatgtc
accatgcaaaaccatgtaggagagaaaccttcacaaagtgctgagcgacatgggcatacc
atgtgttcccgctacttagtcgttgtggagacatgtatgtcattggcctctcaggttgtg
aagctaactaagcaactaaaggagcagacagtagaacgtgtgacattacagaaccaactc
cagcagcttttagaagcccagcggtcagagggcaaggcactgcccatgtcctcaagctcg
ccatcatcccctgcctctggcaaaccccagtggaaaccatctgaagtagatgaattgtct
ccaccaaaaagtaaattgaacacccaagatgggattcagattcttggcagcttgggaact
tctagtcgcactcgagccaagataaaagatgaggactcagataaaatcttgcgccagttg
ttgggaaaggaaatctctgaaaatgtctgtatgcaggaaaagctgactttggaatttcag
gatgctcatgcatcctccaagaacgtgaagaagattttgccagagaaaagggagctgaag
ttagccagactgaggcagcttatgcagaggtctctcagcgagtctgacaccgactcagct
aattctgaggaccataagaacacccctgtgaaaagaactgacaagccaaggcctcagccc
atagtggaaagtgttgagagcacagagagtttgcacctgatgattaagaaacacacttca
gcagcagggcgccgcttcccttttggtaccagagcttctaagtcagtggatggccacagc
ccttcccctacttcagagagcagtgatccagataacgaagcccagtatcagtctggtact
gtacctcagagccagttttgtggagacagctctccgtccagcacagacagtgccactgct
caaaaggttgccacaagccccaagagtgctctcaagtctccatcttcaaagcgcagaacc
tcccaaaatttgaaactcagagtaactttcgaggagcctgtggtgcaggtggagctagca
gagtcagaactaaatgaggaaaaggacaaagatcggggcaaagcacttttgcgggctcca
cccagcactggggaaccagcaggagaccagctaaaaaggccttttggaacctttagatcc
ataatggagacgctgagtggtaaccaaaataacaacaacaactgccaaacagcaaatctg
atcaaaacctcatcgacgctgccttttacgtcattaggaaggaagacagcagacagcaag
ggaaatccagcagctctcacaaaaggaagaaacaagccagggccttactgcagccacacc
agtttttcctctagcacactgaatgaagaacatctgtgtaactatgcttggcatgatgac
atcagtaagaaaagccagaaatcctacagtcaaaaaagttctgaagagccagagctgcag
gaatttttcctctaa
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