Oxyura jamaicensis (ruddy duck): 118157055
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Entry
118157055 CDS
T11549
Name
(RefSeq) desmoglein-4-like
KO
K07599
desmoglein 4
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118157055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oja04515
]
118157055
Cell adhesion molecules [BR:
oja04515
]
Cadherins
Major cadherins
118157055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
RET_CLD1
DUF7314
Motif
Other DBs
NCBI-GeneID:
118157055
NCBI-ProteinID:
XP_035167200
LinkDB
All DBs
Position
2:complement(join(18354..19319,21194..21402,23006..23066,23558..23706,25618..26019,27168..27386,27525..27667,28700..28959,29141..29326,29601..29735,30004..30167,31006..31153,31307..31462,32672..32800,33175..33210,39966..40013))
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AA seq
1136 aa
AA seq
DB search
MDWLPHRTAAFLFLLLVFLDFSTGFHVEVKEWSENGTARWKTFRRQKREWIKFAAACREG
EDNSKRNPIARIRSDCEENNPITYSISGVGIDRAPYGIFVINPRTGDINITAIVDREVTP
VFVIRCFAKHSVTGIDLEPPLELRVRVLDINDNPPIFAQSVFTGAVEECSMDNTLVMKII
ASDADEPNNLNSKIAFKIESQEPSGPPMFVMKKATGELHLANYLDREQHSSYTLVVKASD
RDGAGDGISSLCSCHVKVIDVNDNFPTLAQSSFSAAISENSLSSELLRIQALDADEEFTD
NWLAEFFFISGNEDNCFEIVTDPATNQGILRVIKELNYEHIRTHSLSIGVRNRAEFHHSV
MSQYQVIGTPLIVEVKNVIEPPRFNPSSIIFFVSQRTRVNYVVGTYTAIDEDTGTTATNV
VYSIGRDPGAWFRINQNTGEITLNKVIDWESSYVSHGQYRAEVLAITRGIPQYTATGTIV
LTMQGVNDNCPTINTALRKVCMHSPSVVITAKSVNGDLYGLPFTFSIHGEPQTTWIIRSI
NATSAELVSQNMDFYLYKIYIRVRDSQGRSCLQPYIIPLQACRCDSRNYCSSGATKIIII
GGGGSPDGDRDSWSGWPVTERGNDAVTGWYTNTETYESYTSLYEENGNPIIYGPSSTTLS
GAAIGLMFLGGLIFVLIPILMSMSDCCGCGPGAAAGVGTGFEPVPECTEGAIHPWGIEGA
QPEDRDVSHILAPTTAAGGDFGEPSDIYTNTYGGGGGVCHGVEETTGVGYATGTGYGTAG
GVSGTGEVKGSTGGTIKEYREGGVNMAFLDNYFSEKAFVYADEDEGRPANDCLLIYDHEG
IGTPVGSVGCCSFIGEDTDETYLDTLGPKFKTLAEICLGKEIEPFPDVNPPWPGINVTFP
NPECDLNLPPTGTTILVNGSAPMAPPVGTTTVVTENTYTSASTIQPPRPMPDPLLHGNVT
VTETYTSGSPCVDPLRASNVVVTERVVGPASASDLRGMLDIPDLTDGSNVIVTERVIAPN
SRLPTSLSIPDLVDGSNVVVTERVFRPASGIAGSLINIPSELSNTHNVVVTERVVSGSGM
SGLAGGSLGGANLGGLSSTGQMLSADCHLGQAMGTASPGTSRRRVTKYSTMQYSSQ
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccctcaccgaacagctgcttttttgttccttttattggtattcttggat
ttcagcacaggatttcatgtagaggtaaaagaatggagtgaaaacggaacagcaagatgg
aaaaccttcagaagacaaaaacgtgaatggataaaatttgctgcagcttgtagagaagga
gaagataattctaagaggaatccaattgccagaattcgatcagattgtgaagaaaacaat
ccaataacatacagcatctctggagttggaattgatcgtgccccatatggaatatttgtt
attaacccaagaacaggcgacattaatataacagcaatagtggatagggaagtgacccca
gtatttgttatacgctgctttgctaaacactcagtgacgggtatagatttggaaccacct
cttgaacttcgagtcagagttctggatataaatgataatcctcctatatttgcacaatct
gtatttacaggagctgttgaagaatgcagtatggacaacacactggtgatgaaaataatt
gcatcagatgcagatgaacctaataacttgaattctaaaattgccttcaagatagagagt
caggaaccttcaggcccaccaatgtttgttatgaaaaaggctactggagaactccatctg
gcaaattatcttgacagagagcaacatagtagctacactctggttgtgaaggcatcagat
agagatggagctggagatggaatttcatccctttgtagctgtcatgtgaaagttattgat
gtcaatgacaacttcccaactctggctcaaagctctttttcagcagctatttcagaaaat
tcactcagttcagaactgttacgaatacaagctctggatgcggatgaagagtttactgac
aattggttagcggagtttttctttatatctggtaatgaagataattgctttgaaattgtt
acagatccagctacaaatcaaggaatccttagagtaattaaggaactgaattatgaacat
atccgaactcactcactgagtatcggtgtcaggaacagagctgaattccaccactctgtt
atgtctcagtaccaagtcatcggaacacccctcatagtagaagtaaaaaatgtgattgaa
cctccaaggtttaatccatcttcaattatcttttttgtatcacaaagaacgagggtaaac
tatgttgtgggaacatacacagctattgatgaggacacagggactactgcaaccaatgtt
gtatatagtataggacgtgatccaggtgcctggttcagaatcaatcaaaacactggtgaa
atcacactgaacaaagttattgactgggaatcctcctatgtatcccatgggcagtacaga
gcagaggttctggctattactagagggattccccaatatactgctactggcaccattgtg
cttacaatgcaaggagtcaatgacaattgcccaactattaatacagcattaaggaaagta
tgtatgcattccccatcagtggtcatcacagcaaagagcgtgaatggtgatctatacggg
ctcccctttacgttcagcatacatggtgaacctcaaactacatggattatcagatcaata
aatgctacctctgcagaattagtgagtcagaacatggacttctacctttacaagatctat
attagagtaagagatagccaaggccgaagctgcttacaaccgtacataattcctctacaa
gcttgtcgctgtgacagtcgcaattattgcagtagtggggccacaaaaataattatcatc
ggtggtggtggtagtcctgatggtgacagagatagttggtctggttggcctgttactgaa
agaggaaacgacgctgtgacaggctggtacactaacactgaaacttatgaatcatataca
tctctttatgaggaaaatggtaatcctatcatatatggcccgtcttctactacacttagt
ggtgctgccattggcctgatgtttctcggtggcttaatatttgttctgattccaattctg
atgtcaatgagtgactgttgtggctgtggacctggagctgcagctggagttggaactgga
tttgaacctgtacctgaatgcacagaaggggcgattcatccatggggaatagaaggtgca
cagcctgaagatagggatgtctcacacattcttgccccaacaacagctgctggaggtgat
tttggtgaaccttctgatatatatacaaacacatatggaggaggaggaggagtatgtcat
ggtgttgaagaaactacaggggttggctatgccactggtactggttatggaacagctgga
ggagtttctggaacaggggaagtaaaagggtcaaccggaggaacgataaaagagtatcga
gaaggaggggtgaatatggccttcctagacaactacttctctgagaaagcatttgtctat
gcagatgaagatgaaggtcggccagcaaatgactgcctattaatatatgatcacgaagga
ataggtactcctgtcggctctgtcggttgctgcagctttattggagaagatacagatgaa
acatatttggatacattaggaccaaaatttaagacactggcagagatctgtctgggcaag
gagatcgaacctttccctgatgtcaacccaccttggccaggcattaacgtcacctttccc
aaccctgaatgtgacctgaacctcccgccaactggaaccaccatccttgtcaacggctct
gcacccatggctcccccagtcggcactaccacagttgttactgaaaacacctacacatct
gcatctaccatacagcccccacggcccatgcctgatcctttgctccacggcaacgtgaca
gtgacagagacctacacttctggctctccttgtgttgacccactgcgtgcatccaatgtt
gttgtaacagaaagggttgttggtcccgcgtctgcctctgatctgcgtggcatgctagat
attcctgatctcacagacgggtccaatgttatcgtcacggaaagagtcattgcacctaac
tcccggcttccgacatctctgagcattcccgatttggtagatgggtcgaatgtggtggtg
acagaaagggtgttcaggcctgcctctggcattgcaggcagcttaataaatattccctca
gagttatccaacacccacaatgtggtggtcaccgagagggtagtgtcagggtctggaatg
agcggcctagcggggggaagcctgggaggggcaaacctggggggcctaagcagcacaggt
cagatgctcagtgccgactgccaccttggccaggcaatgggcacagcgtcccctggcacc
tcccggagaagagtgacaaagtacagcaccatgcagtactccagccagtaa
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