KEGG   Oxyura jamaicensis (ruddy duck): 118157490
Entry
118157490         CDS       T11549                                 
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
  KO
K14794  ribosomal RNA-processing protein 12
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oja03009]
    118157490 (RRP12)
Ribosome biogenesis [BR:oja03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    118157490 (RRP12)
  Pre-60S particles
   Other pre-60S particles
    118157490 (RRP12)
SSDB
Other DBs
NCBI-GeneID: 118157490
NCBI-ProteinID: XP_035167732
LinkDB
Position
6:complement(join(49013..49115,49314..49396,49740..49807,50071..50149,50402..50451,50648..50764,50886..51058,51242..51400,51502..51593,51899..52056,52135..52242,52371..52476,52550..52630,52708..52866,53014..53107,53300..53367,53616..53770,53888..54050,54168..54232,54375..54496,54700..54842,54916..55030,55138..55235,55382..55493,55570..55661,55741..55839,56180..56307,56586..56724,56838..56954,57026..57131,57248..57324,57527..57610,57701..57939,58384..58579))
AA seq 1315 aa
MAAGAGSGSAAGRHVARGSMARCGRLRAGAAAKLPRWRKGHSSDCNPETRRHRLAARSRF
YSRPAEKSALTVDAVKLHNELQSGSLRSGGRAVPLPMEEEEEEGGGEAATERSSGTFLSG
LSDCTNVTFSKVQRFWESSSAAHKEICAVLAAVTEVIRSRGGKETETEYFAALMTTLEAV
DSPESLAAVAYLLNLVLKRVPSPVLIKKFSDTSKAFMGIVSSQACSGSTSALRWVLSCLA
TLLRKQDLAAWSYPVTLQVYHGLLSFCVHTKPKVRKAAQYGVCSVLRGSEFMFGDAAPEH
HPAAPSTAKFCVQEIEKAGGAREATTTLHVLTLLRDVLPCFPAAAVKTCCETLLRVMTLS
HVLVTACAMQAFYSLFSAQPSTSCLPAELNAQIITALYDYVPSASDLQPLLTWLSTMERA
HVNLGRLQKDLCWAHLPRLFSAAMNCFLSPHSQVVSAAAQTLENLLTECVAPHMDELGTV
TASAPAPASYLCKMFRSVEDGLTYRFHAAWDEVLQVLEIFFESCGKQCHPVMRKCLQSLC
DLRLSPHFPYTAEVDQAVGAAVAAMGPEVLLEAVPLQIDGKEENLDFPRSWLLPVLRDYV
QGARLGFFTSYFLPLAAALKSRALEFAQAGKSLESKIYDTLQWQVWSLLPGFCTHPTDVV
GAFKGLARTLGMAISERPDLRPTVCQALRTLIQRGCETDAERAEVGRFAKNFLPILFNAY
SQPEGDGGSSTQRRSVLDTVRAYLTITDPQMVCGFLQKASEKLTSPESSEFARLSLLDLV
VAMAPYADEQSLGSLYSTIQPSLQSKERSMQKKAYRVLEEVCAAPHAPCQAFVRSHLEEL
QAALLDSLKSAASPAKRPRLKCLLHIVKQLSAEHEPFVTALVPEVILCTKEVSAAARKNA
FVLLVEMGNAFIRFGPTPQEAMERFLLLVYAGLTGSVTMISCTVLALTRLFFEFKDHMGL
SVVEQLLQNVCLLLGSRTRDVVKAALGFLKVVLLLVDTKLLAKHVQTMLEAVGGLSDDMR
RHFRMKLRNLFTKFIRKFGFELVQGLLPAEFHKVLVNIRKAEARSRKRRALRQAAAETEE
EEEEPAQPRGDSMEEILADSEDSEEEEEERQRGRAWKKQARQKGQAWLKEGEEDEPLNFL
DPKVSQRVLATEPAPKRSRKVSHDFQVSEDGRLIIHDEEEEMADGGAKGADEEVADVLQE
VGLRTKKSQKRRFREEADDEEPEAGTYPQYRAGGSGIHRQLGKEPAFGAEYRSKKGKGDV
KKKGQLDPYAYIPLNRARLNKRKQAKMQGQFKGLMKGAQRGARAGRKSHLKNRRP
NT seq 3948 nt   +upstreamnt  +downstreamnt
atggcggcgggcgccggaagcggaagcgcggcggggcggcacgtggcgcggggcagcatg
gcgcgctgcgggcggctgcgggcaggggccgccgccaagctgccgcgctggcggaagggg
cacagcagcgactgcaaccccgagacccgccggcaccgcctggccgccaggagccgcttc
tacagccggcccgccgagaagagcgccctgacggtggacgcggtgaagctgcacaatgag
ctgcagtcggggtccctgcgctcggggggccgcgcggtgccgctgcccatggaggaggag
gaggaggagggtggtggcgaggccgccacggagaggtcctcgggcaccttcctcagcggg
ctgagcgactgcaccaacgtcaccttcagcaaggtgcagcgcttctgggagtccagctct
gccgctcacaaggagatctgcgcggtgctggcggccgtgacggaggtgatccgctcgcgg
gggggcaaggagaccgagacggagtactttgctgcgctgatgaccacgctggaggcagtg
gactccccagagtctctggccgctgtggcctacctgctcaacctcgtcctgaagcgggtc
ccgagcccggtgctcatcaagaagttctcggacacctccaaagccttcatgggcatcgtg
tcctcgcaggcctgcagcggctccacctctgccctgcgatgggtcctgtcctgcctggcc
acgctgctgcgcaagcaggacttggcagcctggagctaccccgtcaccctccaggtctat
cacggcctgctgagcttctgcgttcacaccaagcccaaggttcggaaagcagctcagtac
ggcgtctgctccgtcctgagaggcagcgagttcatgtttggagatgcagcccccgagcat
caccctgcggcaccctccacggccaagttctgcgtgcaagagatcgaaaaagccggaggt
gccagggaggccaccaccacgctgcacgtcctgaccctgctgcgggacgtgctgccctgc
ttccctgcggccgcggtgaagacgtgctgcgagaccctgctcagagtcatgaccctcagc
cacgtgctggtgaccgcgtgcgccatgcaggccttctacagcctattcagcgcccagccc
agcacctcctgcctgccggccgagctcaacgcccagatcattaccgcgctgtacgactac
gtgcccagcgccagcgacctgcagccgctgctcacctggctgtccaccatggagagggcg
cacgtcaacctgggcaggctgcagaaggacctgtgctgggctcacctgccccgtctcttc
tcggctgccatgaactgcttcctgtccccgcactcgcaggtggtgtcagctgcggcgcag
accctcgagaacctcctgaccgagtgcgtggctccccacatggacgagctgggcaccgtc
actgcgtctgccccagcccccgcctcctacctctgcaagatgttcaggtcggtggaggac
ggcctgacatatcgcttccacgcggcgtgggacgaggtgctgcaggtgctggagattttc
ttcgagtcgtgcgggaagcagtgccaccccgtcatgaggaagtgcctccagtcgctgtgt
gacctgcgtctgtccccgcacttcccctacacggctgaagtggaccaggcggtgggggcc
gccgtggctgccatgggccccgaggtgctgctggaagccgtgcccctgcagatcgacggc
aaggaggagaacctggatttcccccgcagctggctgctgcccgtgttgcgggactacgtg
cagggcgcgcggctcggcttcttcaccagctacttcttgcctttagcggccgccctgaag
agcagagccctggaatttgcccaggctgggaagagcctggagtccaagatctacgacacg
ctgcagtggcaggtctggagcctgctgcccggcttctgcacccaccccacggacgtggtg
ggggccttcaaggggctggcccgcaccctgggcatggccatcagcgagcgcccggacctc
cgccccaccgtgtgccaggccctgcgcaccctcatccagcggggctgcgagacagatgcg
gagcgagcagaagtgggtcgctttgccaagaacttcctgcccatcctgttcaacgcgtac
agccagcccgagggggacggcggcagcagcacccagcgccgctccgtgctggacaccgtg
cgcgcctacctgaccatcaccgacccgcagatggtgtgcgggttcctgcagaaagccagc
gagaagctgaccagtcctgagagctcagagtttgccaggctctccctcctggatctggtg
gtggcaatggccccctacgctgacgagcagtccctgggctccctgtacagcaccatccag
ccttccctgcagagcaaggagcgcagcatgcagaagaaggcgtaccgggtgctggaggag
gtgtgtgccgctccccatgccccctgccaggccttcgtccgctcgcacctggaggagctg
caggcggcgctgctggactcgctcaagagcgcggcatccccggccaagaggccccggctg
aagtgcctgttacacatcgtgaagcagctctcggctgagcacgagccctttgtcaccgcc
ctggtcccggaggtcatcctgtgcaccaaggaggtctcggcggcggcccgcaagaacgcc
tttgtgctgctggtggagatggggaacgccttcatccgctttgggcccactccccaagag
gccatggagcggttcctgctcctggtgtacgcggggctcacgggctcggtcaccatgatc
agctgcaccgtgctggcgctcacccgcctcttcttcgagtttaaagatcacatggggctg
agcgtggtggagcagctcctgcagaacgtctgcctgctgctgggctcccgcacgcgcgac
gtggtgaaggctgccctgggcttcctcaaggtcgtgctgctgctggtcgacaccaagctg
ctggccaagcacgtccagaccatgctggaagctgtggggggcctttcggatgacatgagg
cgccacttccgcatgaagctgcgaaacctcttcaccaagttcatccgcaagttcggcttc
gagctggtgcaggggctgctgcccgccgagttccacaaggtgctggtgaacatccgcaaa
gctgaagcccgcagccgcaagcggcgcgccctgaggcaggcggcggcggagacggaggag
gaggaggaggaaccagcccagcccagaggagacagcatggaggagatcctggcagactcg
gaggactcggaggaggaagaggaggaacggcagcgaggcagggcatggaagaagcaagca
cggcagaagggccaggcatggctgaaagaaggggaagaggatgagcccctcaacttcctg
gaccccaaagtgtcccagcgggtgctggccaccgagccagcccccaagagatccagaaaa
gtgagccacgacttccaggtgtccgaggacgggcgcctgatcatccatgatgaggaggaa
gagatggctgatggtggagctaaaggtgcagacgaggaggtggcggacgtgctgcaagaa
gtgggccttcgcaccaagaagagccagaagcgtcggttcagagaggaggcagacgatgag
gaaccagaggccgggacctaccctcagtacagagccggaggctctgggatccatcggcag
ctgggcaaggagccagccttcggtgcagagtacagatccaagaaaggcaaaggcgacgtg
aagaagaagggccagctcgacccctatgcctacatccccctgaacagggccaggctcaac
aaaaggaagcaggcgaaaatgcagggccagttcaagggcctgatgaagggcgcccagcgc
ggggccagggctggccgcaagagccacctgaagaaccggcgcccctga

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