KEGG   Oxyura jamaicensis (ruddy duck): 118157771
Entry
118157771         CDS       T11549                                 
Name
(RefSeq) B-cadherin
  KO
K06796  cadherin 3, type 1, P-cadherin
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04514  Cell adhesion molecule (CAM) interaction
oja04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    118157771
   04519 Cadherin signaling
    118157771
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oja04515]
    118157771
Cell adhesion molecules [BR:oja04515]
 Cadherins
  Major cadherins
   118157771
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Ig_CLSTN Cadherin_FAT4_N TM_ErbB1
Other DBs
NCBI-GeneID: 118157771
NCBI-ProteinID: XP_035168135
LinkDB
Position
11:complement(join(5542..5754,5828..5971,6042..6172,6252..6470,6556..6780,6984..7126,7197..7441,7518..7703,7776..7904,7991..8166,8319..8463,8538..8693,8898..9008,9104..9237,9522..9527,10952..11048))
AA seq 819 aa
MRGSRSGLCPLLLLLLLPAAAAPARPCAPPGSAGDGTVRYEDEEPHTGAAAPRHPGWLLV
TPQDATSRPVPVRSRRSLQEVPDVPGALRRRKRDWVIPPIKVPENERGPFPKKLVQIKSN
RDREAKIFYSITGQGADTPPEGIFTIEKETGWMKVTQPLDREHMDKYHLFSHAVSENGKP
VEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSVMQVNATDADDAVETYNGVLA
YSILSQEPREPHPHMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALA
VIEITDVNDNAPEFDPKMYEAAVPENEAGLEVARLLTTDLDEPQTPAWRAVYSIVRGNEG
SAFAITTDPASNEGVLRTAKALDYEAKRQFVLHVAVANEAPFAVKLPTATATVTVSVEDV
NEAPAFDPPVRLAQVAEDAPLGQPLASYTAQDPDRAQRQRIKYVVGSDPAGWLAVHPENG
LITARDHLDRESPFAKNSTYTAVLLAVDDGSPPATGTGTLLLTLLDVNDHGPEPEPRNIV
VCNRSPVPQVLTVIDRDLPPNTGPFRAELSHGSGDSWAVEVGDTGDTVTLRLTEPLEQEE
YSVYLRLFDRQGKDQVTVIKAQVCECQGRVESCAYEPQTATGVPIILAVLGALLAFLIIL
LLLLLFVRRRKVVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDLSQLHRGLDARPEVIR
NDVAPPLMAAPQYRPRPANPEDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAVS
LSSLNSSDSDQDQDYDYLNEWGNRFKKLAELYGGGEDDE
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgcgggggtcgcgctccgggctctgcccgctcctcctgctcctgctcctcccggctgcc
gccgccccggcccggccgtgtgcccccccggggtcagcaggcgatggcacggtgcggtac
gaggatgaggagccccacaccggagcagcggcaccgaggcaccctgggtggctgctggtg
actccccaggatgccaccagccgcccggtccctgtgcggagccggcgctccctgcaggag
gtccctgatgtccccggggctctgaggagacggaagagggactgggtgatccctcccatc
aaggtccctgaaaatgagaggggcccgttccccaaaaagctggttcagatcaaatccaac
cgggaccgggaggcgaagatcttctacagcatcacggggcagggggcagacacccccccc
gagggcatcttcaccatcgagaaagagacgggctggatgaaggtgacgcagccgctggac
cgggagcacatggacaagtaccaccttttctcccacgccgtgtccgagaacggcaaaccc
gtggaggagcccatggagatcatagtgacggtgacggaccagaacgacaacaagccccag
ttcacgcaggaggtgttcaggggctctgtgcccgagggtgctttgccaggcacctcggtg
atgcaggtgaacgccacggatgcagatgacgctgtggaaacctacaacggtgtcctcgcc
tactccatcctcagccaggagccccgggagccccatccccacatgttcaccgtcaacagg
gccaccggcaccctcagcgtcattgccagcggcctcgaccgcgagcgcgtgcgggagtac
acgctgactgtgcaggcggccgacctggatggcgaggggctgaccacaacagcgctggct
gtgattgagatcacggatgtgaacgacaacgcccccgagtttgaccccaaaatgtacgag
gcggctgtgccggagaacgaagccgggctggaggtggcccggctgctcaccacggacctg
gacgagccccagacgccggcgtggcgcgccgtctactccatcgtgcgcggcaacgagggc
agcgccttcgccatcaccaccgaccctgccagcaacgagggcgtcctgcggacagccaag
gctctggactacgaggccaagcggcagtttgtgctccacgtggccgtggcgaacgaggcc
cccttcgccgtcaagctgccgacggccacagccacggtgacggtcagcgtggaggacgtg
aacgaggcacccgccttcgaccccccggtgcggctcgcccaggtggcagaggacgcgccg
ctggggcagcccctcgcctcctacacggcccaggaccccgacagagcccagcggcagcgc
atcaagtacgtggtgggcagcgacccagcgggctggctggccgtgcacccggagaacggg
ctcatcacggcgcgggaccacctggaccgcgagtcgcccttcgccaagaacagcacgtac
acagccgtgctgctggccgtggatgacggatctccacccgccacgggcactggcaccctg
ctcctcaccctgctggacgtgaatgaccacggccctgagcctgagccccgcaacatcgtc
gtctgcaaccgcagccccgtgccccaggtcctcaccgtcatcgacagggacctgcccccc
aacacgggtcccttccgtgccgagctgagccacggctcgggggacagctgggcggtggag
gttggtgacacaggtgacaccgtcaccttgcggctgacggagccgctggagcaggaggag
tacagcgtctacctgcggctcttcgaccgccagggcaaggaccaggtcaccgtcatcaag
gcacaagtgtgcgagtgccaggggcgggtggagagctgcgcctacgagccgcagacggcc
accggcgtgcccatcatcctcgccgtgctgggcgccctcctggcttttctgatcatcctg
ctgctgctgctgctctttgtgaggaggaggaaggtggtgaaggagccgctgctgctgccg
gaggacgacacgcgggacaatgtcttctactacggggaggagggcgggggcgaggaggac
caggactacgacctgagccagctccaccgcggcctggatgcccgccccgaggtgatccgc
aacgacgtggcccccccgctgatggcagccccccagtaccggccccggcccgccaacccc
gaggacatcggcaccttcatcgacgagaacctgaaggcggctgacacggaccccacggcc
cccccctacgactccctgctggtcttcgactacgagggcagcggttcggaggccgtctcg
ctcagctccctcaactcctccgactccgaccaggaccaggactacgactacctcaacgaa
tggggcaaccgcttcaagaagctggcggagctctacggcggcggggaggacgatgagtag

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