Oxyura jamaicensis (ruddy duck): 118157843
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Entry
118157843 CDS
T11549
Symbol
SEMA3B
Name
(RefSeq) semaphorin-3B
KO
K06840
semaphorin 3
Organism
oja Oxyura jamaicensis (ruddy duck)
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Ortholog
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Motif
Pfam:
Sema
Ig_3
Ig_6
PSI
Ig_SEMA-3_4_7A
ig
I-set
V-set
Ig_2
Motif
Other DBs
NCBI-GeneID:
118157843
NCBI-ProteinID:
XP_035168229
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All DBs
Position
12:complement(join(2430..2819,2894..3033,3104..3159,3247..3404,3502..3543,3654..3745,3829..4048,4145..4289,4361..4430,4530..4644,4730..4875,5095..5214,5302..5395,5470..5589,5671..5733,5848..6005,6749..6863))
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AA seq
747 aa
AA seq
DB search
MSSPLLLLLLLLLLLLRGPAAGRPPPATATPRLRLAFPELRARHGLRLFQLERSCCYEAL
LLDEERGRLFVGAKNHLVSLSLDNIAQRDRKIYWPAPVEWREECNWAGKDITAECMNFVK
ILHAYNRTHLYACGTGAFHPTCAFVEVGQHTEDHVFKLDPRHAEDGKGKSPYDPRHTAAS
VLVGEELYSGVATDLMGRDFTIFRSLGPRPSIRTEQHDSRWLNEPKFVDVFWVPESENPD
DDKIYFFFRETAVERQQGLGKTSFTRIGQICRNDVGGQRSLVNKWTTFLKARLVCAVPGA
DGADTYFDELRDVFLLQTRDKRNPLVYAVFSTSSSVFQGSAVCVYTMADIRRAFLGPFAH
KEGPNYQWVPYQARVPYPRPGMCPSKTFGTFSSTKDFPDEVIQFARHHPLMYNPVLPHGQ
RPLFLQAGVPYTFTRIAVDRVSAADGHYDVLFIGTDVGTVLKVVSVPQERWHGMEELLLE
ELQVFQDASPIISLQLSSKRQQLYAGSTTAVAQLPLHRCSAYGKACAECCLARDPYCAWD
GTACTRYVPSTKRRSRRQDVRNGDPNLLCSEEPRRGRVPQRQLYAVEGSSTFLECVPRSL
QARVLWTYQHSPDAPQREVQPDERVVWTERGLLLRSVQRSDAGLYLCRATEHGFTQPLLR
LALEVIAASRAAGPLSPGAPAPSRTLWYRDFLQLLERPEAACEGPRGGSRSPRTQAGPPA
RPGEEPRAARRRRTRGGPRGPRSASPW
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccgctgctgctgctgctgctgctcctgctgctcctgctgcgtggccccgcc
gccgggcgccccccgcccgccaccgctaccccccgcctcaggctggccttcccggagctg
cgggcccgccacgggctgcgcctcttccagctggagcgctcgtgctgctacgaggccctg
ctgctggacgaggagcgcggccgcctcttcgtgggcgccaagaaccacctggtgtcgctg
agcctggacaacatcgcccagcgggacaggaagatctactggcctgcaccggtggagtgg
agggaagagtgcaactgggctggcaaggacatcactgccgagtgcatgaacttcgtgaag
atcctgcacgcctacaatcggacccacctgtatgcctgcggcaccggcgccttccacccc
acctgtgccttcgtggaggtcggccagcacacggaggaccatgtcttcaagctggaccca
cggcacgctgaggacggcaagggaaagagcccctatgacccccggcacacggccgcctct
gtcctcgtgggtgaggagctctactccggggtggccaccgatttgatggggcgcgacttt
accatcttccgcagcctgggtccgcgcccgtccatccgtaccgagcagcacgactcccgc
tggctcaacgagcccaagttcgtggacgttttttgggtgcctgagagcgagaaccctgac
gacgacaaaatctacttcttcttccgcgagacggcggtggagcggcagcaggggctgggc
aagaccagcttcacccgcatcggccagatctgcaggaacgacgtgggcgggcagaggagc
ctggtgaacaagtggacgacgttcctgaaggcccggctggtctgtgccgtgccgggcgcc
gacggtgctgacacgtacttcgacgagctccgtgacgtcttcctgctgcagacaagggac
aagcgcaaccccttggtctatgcggtcttctccacctccagctccgtcttccagggctcg
gccgtctgtgtctacaccatggctgacatccgccgggctttcctggggccctttgcgcac
aaggagggccccaactaccagtgggtgccgtaccaggcccgtgtgccgtacccccgccca
ggcatgtgccccagcaaaaccttcggcaccttcagctccaccaaggacttcccagatgag
gtgatccagttcgcccggcaccacccgctcatgtacaacccggtgctgccccacggccag
cggcccctcttcctgcaagccggcgtgccctacaccttcacccgcatcgccgtcgaccgc
gtctctgccgctgatggccactacgacgtcctcttcatcggcacagatgtcggcaccgtg
ctgaaggtggtctccgtgccccaggagaggtggcatggcatggaggagctgctgctggag
gagctgcaggtcttccaggatgcgtcccccatcatcagcctgcagctctcctccaagcgg
caacagctctatgccggctccaccacggcagtagcccagctgcctctgcaccgctgcagt
gcctatggcaaagcctgcgccgagtgctgcctggccagggacccgtactgtgcctgggac
ggcaccgcctgcacccgctacgtgcccagcaccaaaaggcgttcccgccggcaggacgtc
cgcaacggggaccccaacctgctctgctctgaagagccgcggcggggccgcgtgccccag
aggcagctctacgcagtggagggtagcagcaccttcctggagtgcgtgcccaggtccctg
caagctcgcgtgctctggacctaccagcacagccccgatgctccccagcgagaggtgcag
ccggacgagcgggtggtttggacggagcgggggctgctcctgcgcagcgtccagcgctcc
gacgctggcctctacctgtgccgtgccaccgagcacggcttcacccagcccctgctgcgc
ctggcgctggaggtgatcgccgccagccgggcggcagggccgctgtccccgggcgccccc
gcgccctcccgcacgctctggtaccgggacttcctccagctgctggagcggccggaggcg
gcctgcgaggggccgaggggcggctcacggtccccccgcacccaggccgggccccccgcg
cggcccggagaggagccgcgggccgcccgccgccgccgcacccggggagggccgcggggc
ccccgcagcgcttccccatggtga
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