KEGG   Oxyura jamaicensis (ruddy duck): 118157970
Entry
118157970         CDS       T11549                                 
Symbol
AP1B1
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
  KO
K12392  AP-1 complex subunit beta-1
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    118157970 (AP1B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118157970 (AP1B1)
Membrane trafficking [BR:oja04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    118157970 (AP1B1)
SSDB
Motif
Pfam: Adaptin_N Cnd1 B2-adapt-app_C HEAT_2 HEAT Alpha_adaptinC2 PDS5 Cnd3 HEAT_GCN1 RTP1_C1 Arm HEAT_EZ XMAP215_CLASP_TOG NELF-A_N PIK3R4-like_middle HEAT_spiro Alpha_adaptin_C Arm_2 API5 FANCI_S3 Transposase_22
Other DBs
NCBI-GeneID: 118157970
NCBI-ProteinID: XP_035168408
LinkDB
Position
15:complement(join(12..86,761..915,1146..1232,1603..1687,1794..1923,2449..2594,2693..2836,2946..2975,3260..3280,3646..3847,4066..4325,4400..4498,4871..5036,5460..5575,5938..6033,6256..6376,7310..7531,7954..8144,8742..8987,9514..9649,10297..10402,10489..10525))
AA seq 956 aa
MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA
VAALSEIAESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYTPKDDREAQSI
CERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSAEPELQY
VALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE
YATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIKDIFRK
YPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVAAKEV
VLAEKPLISEETDLIEPTLLDELICYIGTLASVYHKPPSAFVEGSRGVVHKSLPPRTGSS
ESAESPEAAPSAGQAAEQPAVIPAQGDLLGDLLNLDLGPPVSGPPLAASSVQMGAVDLLG
GGLDSLMGDESEGLRSDVGGSPAMGGGGGFAAPGPAVPASMGAPLGSGLGDLFDLTGGVG
TLSGSYVAPKSVWLPAMKAKGLEISGTFSRQVGSISMDLVLTNKALQVMSDFAIQFNRNS
FGLAPAAPLQVHAPLAPNQSVEISLPLNTVGSVMKMDPLNNLQVAVKNNIDVFYFSTLYP
LHILFVEDGKMERQMFLATWKDIPNENEAQFQIKDCSLSADAVSSKLQGSNIFTIAKRNV
EGQDMLYQSLKLTNGIWVLAELRIQPSNPTFTLSLKCRAPEVSQHVYQAYDTILKN
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgacggactccaagtacttcaccaccaccaagaaaggggagatcttcgagctgaaggcc
gagctcaacagcgacaagaaggagaagaagaaggaggccgtgaagaaggtgatcgcctcc
atgaccgtcggcaaggacgtcagcgctctgttcccggacgtggtgaactgcatgcagacg
gacaacctggagctgaagaagctggtctacctctacctgatgaactacgccaagagccag
cccgacatggccatcatggccgtcaacaccttcgtcaaggactgcgaggatccgaacccg
ctgatccgggcgctggccgtgcggaccatgggctgcatccgcgtggacaagatcacggag
tacctctgcgagcccctgcggaagtgcctcaaggacgaggacccctacgtgcgcaagacg
gcggccgtctgcgtggccaagctccacgacatcaacgcccagctggtggaggaccagggc
ttcctggacaccctcaaggacctcatctcggactccaaccccatggtggtggccaacgcg
gtggcggcgctgtcggagatcgcggagtcgcacccgagcagtaacctgctggacctcaac
ccccagtccatcaacaagctgctcacggccctgaacgagtgcaccgagtggggccagatc
ttcatcctggactgcctggccaactacacgcccaaggacgaccgggaggcccagagcatc
tgcgagcgggtgacgccccggctgtcccacgccaactcggcggtggtgctgtcggcggtg
aaggtgctgatgaagttcatggagatgctctccaaggacctggactactacggcacgctg
ctgaagaagctggccccgccgctggtcaccctgctctccgccgagcccgagctgcagtac
gtggctctccgcaacatcaacctcatcgtgcagaagcggcccgaaatcctgaagcacgag
atgaaggtgttcttcgtcaagtacaacgaccccatctacgtcaagctggagaagctggac
atcatgatccgcctggcttcccaggccaacatcgcgcaggtgctggcggagctgaaggag
tacgccaccgaggtggacgtggacttcgtcaggaaggcggtgcgagccatcggccgctgc
gccatcaaggtggagcaatcggcggagcgctgcgtcagcaccctgctggacctcatccag
accaaggtcaactacgtggtgcaggaggccatcgtcgtcatcaaggacatcttccgcaag
taccccaacaagtacgagagcgtcatcgctaccctgtgcgagaacctcgactccctggac
gagcccgaggcgcgggctgccatgatctggatcgtgggcgagtacgccgagcgcatcgac
aacgccgacgagctgctggagagcttcctggagggcttccacgacgagagcacccaggtc
cagctgcagctgctgacggccatcgtgaagctgttcctgaagaagcccaccgagacccag
gagctggtgcagcaggtgctgagcctggccacgcaggactccgacaaccccgacctgcgg
gaccgcggctacatctactggcgcctgctctccaccgaccccgtggccgccaaggaggtg
gtgctggccgagaagccgctcatctccgaggagaccgacctgatcgagcccacgctgctg
gacgagctcatctgctacatcgggacgctggcctccgtctaccacaagccgcccagcgcc
ttcgtggaggggagcagaggggtcgtgcacaagagcttgcccccgcgaacgggctcgagc
gagagcgccgagagccccgaggcagccccctcggccgggcaggcggcggagcagccggcc
gtcatccccgcgcagggcgacctgctgggcgacctgctcaacctggacctgggccccccg
gtcagcgggccccccctcgccgcctcctccgtgcagatgggtgccgtggacctcctggga
gggggcctggatagcctgatgggggacgagtcggaagggctgcgcagcgatgtgggaggc
agccccgccatgggtggcggcggtggcttcgcggcgcccggccccgcggtgccggccagc
atgggagcgcccctcggcagcggcctcggggacctcttcgacctcaccgggggcgtgggg
accctgtcggggtcctacgtggcgcccaaatcggtgtggctccctgccatgaaggccaag
gggctggagatctccggcacgttcagccgccaggtgggctccatctccatggacctggtg
ctgaccaacaaggccctgcaggtcatgtccgacttcgccatccagttcaaccgcaacagc
ttcggcctggccccggccgcccccctgcaggtccacgcgccgctcgcccccaaccagtcg
gtggagatctccctgccgctcaacacggtcggctccgtcatgaagatggatcccctgaac
aacctgcaggtcgcggtgaagaacaacatcgatgtcttctacttcagcaccctctacccg
ctgcacatcctcttcgtggaggacgggaagatggagcggcagatgttcctggccacctgg
aaggacatccccaacgagaacgaagcccagttccagatcaaggactgttccctcagcgca
gacgccgtcagcagcaagctccaaggcagcaacatcttcaccatcgccaagaggaacgtg
gagggccaggacatgctctaccagtccctgaagctcaccaacggcatctgggtgctggcg
gagctccgcatccagcccagcaaccccaccttcacgctctccctgaaatgccgagcgccc
gaggtctcccagcacgtgtaccaggcctacgacaccatcctgaagaactga

DBGET integrated database retrieval system