KEGG   Oxyura jamaicensis (ruddy duck): 118158043
Entry
118158043         CDS       T11549                                 
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
  KO
K21988  transmembrane channel-like protein
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    118158043 (TMC6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:oja02000]
    118158043 (TMC6)
   03037 Cilium and associated proteins [BR:oja03037]
    118158043 (TMC6)
Transporters [BR:oja02000]
 Other transporters
  Pores ion channels [TC:1]
   118158043 (TMC6)
Cilium and associated proteins [BR:oja03037]
 Other cilia and associated proteins
  Stereociliary proteins
   118158043 (TMC6)
SSDB
Motif
Pfam: TMC
Other DBs
NCBI-GeneID: 118158043
NCBI-ProteinID: XP_035168492
LinkDB
Position
18:complement(join(88743..88814,88981..89059,89232..89408,89875..90008,90209..90284,90981..91076,91216..91313,91666..91747,91884..92059,92309..92464,92734..92878,92967..93157,93459..93713,93822..93918,93991..94096,94216..94374,94512..94631,94893..95011,95243..95298))
AA seq 797 aa
MSQPPPFTLHISEDTESDNQELSPDNEGALHTSFRQLIQEQSSLAEAGTELELQERGRGH
LAPPDASASAWLEPGQGEQHPGDSTTLRILASMPSRTIGRSRGAIISQYYNRTARLRRRS
SRPSLQQLSRTARPSLRQYDLETDPARATLEDKRSLLAKELLSLSPSQRSHMLLSVPLSL
AEKHALRRELNEQRSPLGLRAHHTAALSPCGWSKDYITLGCRHLWYRLLALLPAAQPWHY
ALKQIGGRFGSSVLSYFLFLKTLLMFNVFSFLILLVFVVALQAAYPPAKANQQSFTGFEL
LTGAGYFTHSLLYYGYYSNITLNDPSASSLSGSVPPPAAPQLPYNMPLAYLFTVGVSFFV
TCILLVYSMYHSFGESYRVGSSAGDLAVKVFCAWDFKVIQRRSVKLQCENICTQLKELLA
ERRSRSCPLSLCQRLGHVAVLLLAWVLSLSTVLGCVVAVHYFSEHMHAVQQEHRALAGSS
WQREGILLVLPLTVSLLNTLMPHLYNLLATWERQDSPEVEVYVAICRNLLLKMVVLGLLC
YQWLSRRVVCSTEECWETCVGQDLYRFMVMDFVFTLLDTIFGELVWRLISEKRLKSKQRP
EFDIAQNVLELIYGQTLTWLGVLFAPLLPAVQVLKLLLLFYIKKTSLMQNCRSPSKPWQA
SRMSTVFITLLCFPSFLGAAVFISYTIWSVKPSETCGPFQGLETIYKSVNVWAKLLEESS
PNITWLTWIHQYLVENTFFLFFLSGVLLAVTYFNIQVVRGQQRIICLLKEQITNEGEDKI
FLIQKLHSICKQKEGCA
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgtcccagccgcccccattcaccctccacatctctgaggacaccgagagcgataaccag
gagctgagcccggacaatgaaggagccctgcacacctccttccgccagctcatccaggag
cagagcagcttggcagaggcgggcacagagctggagctgcaggagaggggcagaggccac
ctggcccctccagatgcctctgcctctgcctggctggagcctgggcagggcgagcagcac
ccaggagactccaccaccctgcgcatcctcgccagcatgcccagccgcaccattgggcgc
agccggggggccatcatctcccagtactacaaccgcaccgcgcggctgcggcgccggagc
agccgcccgtccctgcagcagctcagccgcacggcgcggcccagcctgcggcagtacgac
ctggagaccgacccagcccgcgccacgctggaagacaagcggagcctgctggcgaaggag
ctgctgagcctctcacccagccagcgcagccacatgctgctctcggtgcccctcagcctg
gcggagaagcacgccctccggcgggagctgaacgagcagaggagccccctggggctgcgt
gcccaccacacagccgccctgtctccctgtgggtggtccaaggactacatcacgctcggc
tgccggcacctctggtacaggctcctcgctctgctccccgctgcacagccctggcactac
gccctgaagcagatcggcggccgcttcggctccagcgtcctctcctacttcctcttcctc
aagacgctcctcatgttcaacgttttctcattcctcatcctcctggtctttgtagttgcc
ctgcaggctgcatatcccccggccaaagccaaccagcagtccttcactggctttgagctc
ctcaccggagcgggctacttcacccactcgctgctgtactacggctactacagcaacatc
accctcaatgacccctctgcctccagcctcagtggcagcgtgcccccccctgcagccccc
cagctcccctacaacatgccgctggcctacctgttcaccgttggggtctccttctttgtc
acctgcatcctgctggtgtacagcatgtaccactccttcggggagagctaccgtgtgggc
agctctgcgggggacctggccgtcaaagtcttctgcgcctgggacttcaaggtgatccag
aggcgctcggtgaagctgcaatgcgagaacatctgcacccagctgaaggagctgctggcc
gagcggcggtcccgctcctgccccctgagcctctgccagcgactggggcacgtggctgtc
cttctcctggcctgggtcctttcgctgagcacggtgctgggctgcgtggtggccgtgcac
tacttctcggagcacatgcacgcggttcagcaggagcaccgagctctggcgggcagcagt
tggcagcgggaaggcatcctgctggtcctgcccctcaccgtgtcgctcctcaacacgctg
atgccccatctctacaacttgctggcgacatgggagaggcaggattccccagaggtggag
gtctacgtggccatctgcaggaacctcctgctgaagatggtggtcctcggcctgctctgc
taccagtggctcagccggagagtcgtctgctccaccgaggagtgctgggagacgtgtgtc
gggcaggacctgtatcgcttcatggtgatggacttcgtgttcacgctgctggacaccatc
tttggggagctggtctggaggctgatctcagagaagagactgaagagtaagcagaggcct
gagtttgacattgcccaaaacgtgctggagctgatctacgggcagaccctgacctggttg
ggtgttctcttcgcaccgctcctgccagctgtgcaggtgctgaagctgctgctgctgttc
tacatcaaaaagaccagtctgatgcagaactgccggtcccccagcaagccctggcaagct
tctcgtatgagcactgtgttcatcaccctgctctgcttcccatccttcctgggcgctgcc
gtcttcatctcctacaccatctggtcagtgaagccgtcagaaacctgtggccccttccag
gggctggaaaccatctacaagtctgtgaatgtctgggcaaagttgctggaggagtccagc
cccaacatcacctggctcacctggatccaccagtacctggtggagaacaccttcttcctg
ttcttcctgtccggggtgctgctagccgtgacctacttcaacatccaggtggtgagaggc
cagcagaggatcatctgcctgctgaaggagcagattacaaacgagggagaagataaaata
tttctcattcagaagcttcactccatttgcaagcagaaagagggatgtgcctga

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