Oxyura jamaicensis (ruddy duck): 118158070
Help
Entry
118158070 CDS
T11549
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03250
Viral life cycle - HIV-1
oja04144
Endocytosis
oja04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118158070 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118158070 (HGS)
04145 Phagocytosis
118158070 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118158070 (HGS)
Membrane trafficking [BR:
oja04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
118158070 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
FYVE_CARP1-2
CID
Motif
Other DBs
NCBI-GeneID:
118158070
NCBI-ProteinID:
XP_035168527
LinkDB
All DBs
Position
18:join(<177..274,661..736,1283..1375,3292..3415,3795..3847,4339..4407,4590..4714,4952..5030,5117..5215,5419..5514,5903..5941,6025..6168,6316..6529,6715..6887,7056..7196,7275..7452,7533..7666,7982..8098,8326..8421,8494..8604)
Genome browser
AA seq
752 aa
AA seq
DB search
RSVADKATSQLLLETDWESILQICDMIRQGDTQAKYAVNAIKKKVNDKNPHVALYALEVM
ESVVKNCGQTVHDEVANKQTMEELKEILKRQVEASVRSKILNLIQAWAHAFRNEPKYKVV
QDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKHHCRACGQI
FCGKCSSKYSTIPKFGIEKEVRVCEPCYEHLNKKAEGKAAATSELPPEYLTSPLSQQSQL
PPKRDETALQEEEELQLAIALSQSEAEEKERMRQKTTYSMYPKAEPTPVTSSAPPAGTLY
SPPVNSSAPLAEDIDPELARYLNRNYWEKKQEEVRKSPTPSAPLSLAEPAAQPGEAHPTP
LGVVEQQYQNGESEENHEQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVLSLFQSINN
MHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALNALREEHREKLRRAAEEAERQRQI
QLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQMRLEQQKQTIQMRAQMPAFSLPYA
QLQAMPAASGVIYQPSGPTSFPGTFSPAGSVEGSPMHTVYMNQAAQGGTGAYTAMPVTGT
DPNMVNAYMYQAGAGSGQAAQQGQAVPTTTPAYSSYQPTPTQGYQNAASQSQSIPAISQA
PQSGAMGYMGSQSVSMGYQPYGMQGLMSALPGQDAALSSLPPQQPYLPGQQPLYQQVPPA
GGPPPQQQQPQPAAAPVQQPPGSGEAQLISFD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
cgctccgttgcagacaaggcgacgagccagctgctgctggagacggactgggaatccatc
ctgcagatctgcgacatgatccgccagggcgacacgcaagcaaaatatgcagtcaatgct
atcaagaagaaagtcaacgacaagaatccccacgtggcgctctatgcactagaggtcatg
gagtctgtagttaaaaactgtggtcaaacagtccatgatgaagtagctaataaacagact
atggaggagctgaaggaaatactcaagaggcaagtggaagcaagtgtgcgcagtaagatc
ctgaaccttatccaggcctgggctcatgccttccgcaacgagcctaagtacaaggtggtg
caggacacctatcaaataatgaaggttgaaggccacgtgttcccagagttcaaagagagc
gatgccatgttcgctgcggaaagggctccagactgggtagatgctgaagagtgtcacaga
tgtcgagtgcagttcggggttgtgacacggaagcatcattgcagggcctgtgggcagatt
ttctgtggcaaatgctcctccaagtattccaccatccccaagtttgggattgagaaggaa
gtgagagtctgtgagccctgttacgagcatctcaacaagaaagctgagggtaaagctgct
gcaacctccgaactgccccccgagtacctgaccagccctctctctcagcagtcccagctg
cccccgaagcgtgatgagacagctctgcaagaggaggaagagctccagctagccatcgcc
ttgtctcagtcagaggctgaggagaaggagaggatgaggcagaagacaacctactccatg
taccccaaggctgagcccacacccgtcacatcgtcagctccgccggcgggcacgctctac
tccccacctgtgaattcctctgctcccctggctgaggacattgaccctgagctggctcgg
tacctgaaccgcaactactgggagaagaaacaagaggaggttcgcaagagcccgacccca
tcggcacctctgtccctcgcagagccagccgctcagccgggggaagcccaccccaccccg
ctcggtgtcgttgagcagcagtaccagaacggcgagtcggaggagaaccatgagcagttc
ctgaaggctctgcagaacgcggtcaccacgtttgtcaaccgcatgaagagcaaccacatg
cgaggccgcagcatcaccaacgactctgctgtgctgtccctcttccagtccatcaacaac
atgcacccccagctgctggagctgctcaaccagctggatgagcgcaggctgtattacgaa
ggcctgcaggacaaactggcccagatccgggacgcgcgtggggctctgaacgcgctgcgg
gaggagcatcgggagaagctgcggcgtgcagcagaggaggcagagcgccagcgccagatc
cagctggcccagaagctggagatcatgagacagaaaaagcaggagtacctggagatgcag
cgtcagttggccatccagcgcctgcaggagcaggagaaggagaggcagatgcgcctggag
cagcagaagcagaccatccagatgagagcccagatgccagccttctcgctgccttatgcc
caactccaggccatgccagcagccagcggggtgatctaccagccctctgggcccactagc
ttccccggcaccttcagccccgcgggctccgtggagggctctcccatgcacaccgtgtac
atgaaccaggcagcgcaggggggcacgggggcgtacacagcaatgcccgtcacagggaca
gatcccaacatggtgaatgcctacatgtaccaggcgggggctggcagtgggcaggcggct
cagcaggggcaggcggtgcccaccacaaccccggcgtactcgtcctaccaacccaccccg
acgcagggctaccagaatgcagcgtcgcagtcacagagcatccctgccatctcgcaggct
ccccagtcaggcgcgatgggctacatgggcagccagtcagtgtccatgggctaccagccc
tatggcatgcagggcctcatgtcggccctgccgggccaggacgcggcgctgagcagcctg
cccccgcagcagccctacctgccggggcagcagcccctctaccagcaggtgccgcccgcc
ggagggcctcccccccagcagcagcagccgcagccggcggcggccccggtgcagcagccc
ccgggcagcggcgaggcgcagctcatctccttcgactga
DBGET
integrated database retrieval system
