Oxyura jamaicensis (ruddy duck): 118158126
Help
Entry
118158126 CDS
T11549
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118158126 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118158126 (YBX3)
03041 Spliceosome [BR:
oja03041
]
118158126 (YBX3)
Transcription factors [BR:
oja03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
118158126 (YBX3)
Spliceosome [BR:
oja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118158126 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
118158126
NCBI-ProteinID:
XP_035168609
LinkDB
All DBs
Position
1:join(78416955..78417210,78420671..78420734,78422387..78422420,78427455..78427544,78428184..78428306,78433257..78433351,78435002..78435173,78435811..78435876)
Genome browser
AA seq
299 aa
AA seq
DB search
MSEAAENSPAATAPTDTTNTNTTTTTTAADGATPAPTAAAPDAKPRSPGGAAATTTTEAP
GAAAAAAPAAASATTGAAETEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTA
IKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYF
GRRRGPPRSGVEGEIKDGITEGGQLNQQVHRNPTYRPRYRRGPPRPRPAPVAGEAENKEN
QHEANAMSQQPLRRGYRRPYNYRRRPRPPNASAQDGKETKVTETPAENPAPVTEQSGAE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcggcggagaacagccctgccgccacggcgcccaccgacaccaccaatacc
aataccaccaccaccaccacggcggccgacggagccaccccggcgccgaccgcagcagcc
ccggacgccaagcccaggagccccggcggcgctgccgccaccacgaccaccgaggcgccc
ggtgctgctgcagccgctgcccccgccgctgcctccgccaccaccggggcggcggagacg
gagaagaaagtgctggccacaaaagttcttggcaccgtcaagtggttcaatgtgagaaat
ggatatggctttatcaacagaaatgataccaaagaagatgtgtttgttcatcagacggca
ataaagaaaaacaatccacggaagtatctgcgcagtgttggtgatggagagactgtagaa
tttgacgtggtcgagggagagaagggtgcagaagcagctaatgtcactggtccagatgga
gtccctgtagaaggaagtcgctatgctgcagaccggcgccgctatcgacgtggctatttt
ggccgacgccgtggaccacctcggagtggtgttgagggagaaatcaaggatgggatcaca
gaaggaggacaacttaatcagcaagtccataggaatcctacgtatcgtccccgctaccgc
agaggtcccccacgtccacgccctgccccagtggcaggagaggccgaaaacaaagagaac
cagcatgaagccaatgctatgagtcagcagccacttcgccgtgggtataggcgcccatac
aactaccggcgtcgacctcgtccacccaatgcgtcagctcaggatgggaaagagacaaag
gtgactgaaacacctgctgaaaatcctgctccagtgacggagcagagtggcgctgagtaa
DBGET
integrated database retrieval system
