Oxyura jamaicensis (ruddy duck): 118158214
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Entry
118158214 CDS
T11549
Symbol
YKT6
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04130
SNARE interactions in vesicular transport
oja04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
118158214 (YKT6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118158214 (YKT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118158214 (YKT6)
Membrane trafficking [BR:
oja04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
118158214 (YKT6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
118158214
NCBI-ProteinID:
XP_035168732
LinkDB
All DBs
Position
22:complement(join(335..370,685..786,899..964,1040..1144,1321..1421,1713..1795,2361..2464))
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AA seq
198 aa
AA seq
DB search
MRLYSLSVLYKGEPRVQLLKAAYDVSTFSFFQRSSVQEFMTFTSQLIVERSQPGSRASVK
EQEYLCHVYVRSDGLAGVVIADNEYPQRVCFTLLDKVLDEFCRQVSRAEWPSGSPGTISY
AALDGYLSKYQNPRDADPMTRVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGAQ
SKAFYKTARKQNSCCAVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtacagcctgagcgtgctgtacaagggcgagccccgggtgcagctgctgaag
gccgcctacgacgtctccaccttcagcttcttccagagatccagcgtgcaggagttcatg
accttcaccagccagctgatcgtggagcgctcgcagccgggcagccgggcgtccgtcaag
gagcaagagtacctgtgccacgtgtacgtgcggagcgacgggctggccggcgtggtgatc
gccgataacgagtacccgcagcgcgtctgcttcaccttgctggacaaggtgctggacgag
ttctgcaggcaggtgagccgggcggagtggccctcggggtcccccggcaccatcagctac
gcggcgctggacgggtacctcagcaagtaccagaacccccgcgacgccgacccgatgacc
agagtgcaggcggagctggacgagaccaaaatcatcctgcacaacaccatggagtcgctg
ctggagcgcggggagaagctggacgacctggtgtccaagtccgaggtgctgggggcgcag
tccaaggccttctacaaaaccgcgcggaagcagaactcgtgctgtgcggtgatgtga
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integrated database retrieval system
