KEGG   Oxyura jamaicensis (ruddy duck): 118158597
Entry
118158597         CDS       T11549                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04137  Mitophagy - animal
oja04144  Endocytosis
oja04145  Phagosome
oja04148  Efferocytosis
oja05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118158597 (RAB5B)
   04145 Phagosome
    118158597 (RAB5B)
   04137 Mitophagy - animal
    118158597 (RAB5B)
   04148 Efferocytosis
    118158597 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118158597 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118158597 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oja04147]
    118158597 (RAB5B)
   04031 GTP-binding proteins [BR:oja04031]
    118158597 (RAB5B)
Membrane trafficking [BR:oja04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118158597 (RAB5B)
 Endosome - Lysosome transport
    118158597 (RAB5B)
Exosome [BR:oja04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118158597 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   118158597 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   118158597 (RAB5B)
  Exosomal proteins of melanoma cells
   118158597 (RAB5B)
GTP-binding proteins [BR:oja04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118158597 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SDR-like
Other DBs
NCBI-GeneID: 118158597
NCBI-ProteinID: XP_035169158
LinkDB
Position
33:join(322..513,647..769,965..1058,1300..1415)
AA seq 174 aa
MLMLPSLPPSVPPAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYD
ITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFME
TSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQSQQNKSQCCSN
NT seq 525 nt   +upstreamnt  +downstreamnt
atgctaatgctcccctccctccctccctccgtccctccagcggcgttcctcacacagtcc
gtctgcctggacgacacgacggtgaagtttgagatctgggacacggccggccaggagcgg
taccacagcctggcccccatgtactaccggggggcgcaggcggccatcgtggtctacgat
atcaccaaccaggaaacgtttgcgcgggcgaagacatgggtgaaggagctgcagagacaa
gccagccccagcatcgtcatcgccctggccggcaacaaggccgatctggccagcaagcgc
atggtggagtacgaggaggcgcaggcctacgcagacgacaacagcctgctgttcatggag
acgtcggccaagacggcgatgaacgtcaacgacctcttcctggccatcgccaagaagctg
ccaaagagcgagccccagagcacgagcggcgcggcggggaggagcagaggcgtggacctt
cacgagcagagccagcagaacaagagccagtgctgtagcaactga

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