KEGG   Oxyura jamaicensis (ruddy duck): 118160081
Entry
118160081         CDS       T11549                                 
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    118160081 (WDR3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oja03009]
    118160081 (WDR3)
Ribosome biogenesis [BR:oja03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    118160081 (WDR3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR36-Utp21_1st WDR55 WD40_Gbeta Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Utp12 DSE1_N ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_NOL10_N Beta-prop_WDR19_1st CFAP251_N ASA1 Beta-prop_EIPR1 Beta-prop_WDR41 PEP5_VPS11_N WDR54 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WD40_like Beta-prop_LRRK2 PAC11 CFAP43_N Beta-prop_WDR19_2nd DUF6832
Other DBs
NCBI-GeneID: 118160081
NCBI-ProteinID: XP_035170519
LinkDB
Position
1:complement(join(82369607..82369762,82370152..82370245,82371405..82371533,82372024..82372067,82373913..82373960,82374543..82374635,82375513..82375578,82376187..82376237,82377796..82377930,82378045..82378156,82378656..82378756,82379327..82379383,82379999..82380134,82380568..82380653,82382523..82382624,82383274..82383367,82383622..82383852,82384160..82384258,82385184..82385281,82385399..82385500,82386502..82386612,82387070..82387168,82387516..82387594,82388589..82388707,82389266..82389475,82390054..82390224))
AA seq 940 aa
MGLSRQYLRYVPAALFGLVGSAGGNAAMVAVGGERGRGVAVAACEHVFVWDARKGEKVLI
LKGLKQEVRYLCPSPDGLHLAVGYEDGSIRIFNLQSGEANVTFNGHKAAVTAMQYDQLGG
RLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDT
QHCFKTLVGHRTEVWGMALISEEKRLITGTADSELRVWDISYIQEEVKDPDEPESKKSKG
SSPVTEKNTEEDEALELDEGPEERLLKCSKVGSIMREGRDRVVTLATDRTGKILACHGTD
AVLEVFSVLSQEEVQKKLEKKMKKAKKKAKQKCEEEVPEGNVELSLQEEIQRVTNIKASA
KIKSFDMILSPKGELKVVLLLQNNIIESYVLNLSAQVPQAVRASKISIGGHRSDVRTLAF
SSDNIAILSASAESVKIWNRSTLQCIRTMDCEYALCSFFVPGDRQVIVGTKTGKLQLYDL
ASGSLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWEFELVKDESSVQKRLSMKQV
RILQLDEDVLCVRYSPNQKLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCMDISYDG
TLIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDSKIKQWDAD
KFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLVLEEEREMQREAEY
EESVAKEDQPVVAGETQGETGLAGKKTIETIKAAERIMEAIELYREEMAKLKEHKAICKA
AGKEVPYPVNPILRAYGNITPSEYVLEVFKKVKSSELEESLLVLPFSYVPDLLRLFNEYI
RLGAEVELLCRALLFLLKIHFGQITTNQMLVTVIENLKKTTISRVSEARDVLGFNMAGLQ
HLKREIEAKDEVMFFADATDRFEEKKRKRKKKEKMILAVV
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggggctgagccggcagtacctgcgctacgtgcccgccgccctcttcgggctggtgggc
agcgccgggggcaacgccgccatggtggcggtgggaggcgagcggggccgcggcgtggcg
gtggcggcctgcgagcacgtcttcgtgtgggacgcgaggaagggggagaaggttcttatc
cttaagggtctcaagcaggaggtcaggtacctctgcccctctccagacgggttgcacttg
gctgttggctatgaagatggatcgatccgtatcttcaacctccagagcggggaagcgaat
gtcactttcaatggacacaaggctgcagttacggccatgcagtacgaccagcttggcggt
cggctggtatctggctcaaaggatacagatgtcattgtgtgggatgtcatcaacgagagc
ggtctgtaccggctgaaaggacacaaggatgctgtcactcaagtccttttcttgaaggag
aagaacctgctggtcaccagtggcaaagacacattggtgaaatggtgggacctggacacc
cagcactgcttcaaaactctggttggacaccgtaccgaggtttgggggatggctttgata
tcagaagagaaacgtctgatcactgggactgctgacagtgagctgagagtgtgggatatc
agttacatccaagaggaggtaaaagaccctgatgagccagaatccaagaaaagcaaaggg
tcttcacctgtaacagaaaaaaacactgaagaggatgaggccctagagttagatgaaggc
cctgaagagcgcctcctgaagtgcagtaaagttggatccatcatgcgggaagggagggac
cgagtagttactcttgccacagaccgaacgggcaagattttggcctgccatgggactgat
gctgttctggaagtgttctccgtcctttctcaagaggaagtccaaaagaaattggaaaag
aaaatgaagaaagcaaagaaaaaagccaaacagaagtgtgaggaagaggtgcctgaaggg
aatgtggagctgagcctgcaggaggagattcagcgggtcactaacatcaaagcttctgct
aaaatcaagtcgtttgacatgattctctctccaaaaggagagctgaaggttgtgttgctg
ctccagaacaacatcattgagtcatacgtgctgaacctgtcagcacaagtcccacaggct
gtccgcgcatccaagataagcattgggggccaccgcagtgacgttaggacgttggctttt
agctctgacaacattgccattctctcagcatctgcagagtccgtaaagatttggaacagg
tcaaccttgcagtgcatccggacaatggactgtgagtacgcgctctgctcgttctttgtc
ccaggagatcggcaggtcatcgttggcaccaagacagggaagctgcagctgtatgacctg
gcttctgggagtctgatggagacacttaatgctcacgacggggcagtgtggtccattgct
ctgtcaccagaccagcgtggttttgtgacaggaggcgctgataaatgcgtcaagttctgg
gagtttgagcttgtgaaggatgagagcagcgttcagaaaaggctgtccatgaagcaggtg
cgcatcttgcagctggacgaagatgttctgtgtgtgcgttacagccccaaccagaaactg
ctggctgtctccttactggactgcacggtgaagattttctacaccgacacgctcaagttt
ttcctctctctgtacgggcacaagctgccagtgttgtgcatggacatctcctacgatggg
actctaattgccactggctctgctgataggaatgtgaagatttggggcttggattttggg
gactgtcaccgctctctctttgcccatgatgacagtgtgatgtatctccagtttgtggcc
aaatctcatctcttcttcacagctgggaaggacagcaagattaaacagtgggatgcagat
aaatttgagcacatccagacactggaggggcatcaccaggaggtgtggtgtttggcactc
agtcccaatggagactatgtggtgtcagcatcccatgacaagtccctgcgcctctgggaa
aggacaagggagccacttgtgttggaagaggagagggagatgcaacgagaagctgagtat
gaagaaagtgtggcgaaggaagatcagcctgtggtggctggagagacacaaggagagacg
gggctggcagggaagaagaccattgaaaccatcaaagcggctgagcggatcatggaggct
atcgagctgtacagagaagagatggcaaaactgaaggagcacaaggccatatgcaaagct
gcaggaaaagaggttccctatcctgtcaatcccattctccgtgcctacggaaacattaca
ccttccgagtacgtgctagaagttttcaagaaggtcaagtcaagtgagctggaagagtct
ctcctggtgctgcccttctcctacgtccctgacctgctcagactcttcaatgaatatatt
cgcttgggtgcggaagttgaactcctgtgccgtgctctcctcttcctgctcaagatacat
tttggtcagataacaaccaaccagatgctggtgacagtgatagaaaacctgaagaaaacc
accatctccagagtcagtgaggcccgggatgtgctgggatttaacatggcagggctccag
catctgaagagggagattgaggccaaggatgaggtcatgttttttgctgatgctactgac
cgttttgaggagaagaagaggaagaggaagaagaaagaaaagatgattcttgcagtggtt
tag

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