KEGG   Oxyura jamaicensis (ruddy duck): 118160361
Entry
118160361         CDS       T11549                                 
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04810  Regulation of actin cytoskeleton
oja05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118160361 (CYFIP1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118160361 (CYFIP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118160361 (CYFIP1)
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     118160361 (CYFIP1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     118160361 (CYFIP1)
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd zf-CW LRIF1
Other DBs
NCBI-GeneID: 118160361
NCBI-ProteinID: XP_035170905
LinkDB
Position
1:join(134654244..134654360,134654540..134654629,134656034..134656111,134656989..134657090,134658348..134658529,134659864..134659960,134660096..134660224,134661500..134661604,134661801..134661892,134663178..134663295,134663694..134663816,134665177..134665302,134665616..134665782,134667060..134667207,134669082..134669235,134670466..134670622,134671239..134671335,134671684..134671760,134671853..134671961,134672513..134672632,134675440..134675639,134682798..134682885,134692928..134693071,134694687..134694777,134702415..134702545,134703760..134703832,134704973..134705067,134706269..134706507,134707356..134707503,134707973..134708137)
AA seq 1253 aa
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGASIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKLTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgactgctcaagtaacactggaggatgccttgtccaatgtggatctcttggaagagtta
ccattgccagatcagcagccatgtattgaacccccaccatcatctctgctttaccagcca
aacttcaacactaactttgaggacagaaatgcatttgtcactggtatcgcaagatacatt
gagcaagctacagtccactctagcatgaatgaaatgttagaagagggtcaggaatatgcc
gtcatgttatacacatggagaagctgctcaagagcaattccacaggtcaagtgcaacgaa
cagcctaacagagtagaaatttatgagaaaacagtggaagttctggaaccagaagtcaca
aaactgatgaattttatgtattttcagcgaaatgcaattgaacggttttgcggggaggtg
agacgcttgtgccacgcagaaaggagaaaagacttcgtctctgaagcatatctgatcaca
ctgggcaaatttatcaacatgtttgcagttttagatgagcttaaaaacatgaagtgcagc
gtgaagaatgaccattcggcctacaagcgagctgctcagttcctacggaaaatggcagat
cctcagtccatccaagaatcccagaatctctccatgttccttgctaaccacaacaaaata
acgcaatctttacagcagcagttggaagtgattgttggctatgaagaactgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacacccagtgagaag
catatgcttttgaaagttatgggctttggattatacctgatggatggaagtgtcagtaac
atctataagctggatgcaaagaaaaggataaatttagccaagatagacaagttctttaag
caattgcaggtggtcccactctttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaagaaaataaatccagatggacatgcacgtcttccagcagcagt
ccccagtacaatatatgcgagcagatgatccaaatcagagaagaccacatgcgtttcata
tcagagctggctcgttacagcaacagtgaggtggtgactggttctggtcgacaggaagct
cagaaaacagatgcagagtatcggaagctctttgatctctctctccaaggcttgcagctt
ctctctcaatggagtgcacatgtcatggaagtgtattcgtggaagctggtacacccaact
gacaaatattctaataaagattgtcctgacaatgcagaggagtatgaaagagcaacgaga
tacaattatactagtgaggaaaagtttgctttggttgaggtgattgctatgatcaaaggt
cttcaggtgctgatgggaaggatggaaagtgttttcaatcacgccattcgccataccatt
tatgcagctcttcaggactttgcccaggtcacacttagagagccattaagacaagccatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggccatcaggaagaccgtctgtgac
tgggaagcaggtcacgaacctttcaatgacccagctctaaggggagaaaaagaccccaaa
agtggttttgatattaaagtcccaaggcgtgcagtgggaccctccagtactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgagggacccaccatattggacatagaaaaattccaccgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcagtgctgtgatttgtcccag
ctgtggttcagggaattcttcttagaattgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattctgacggaccatattttggagacaaaagaggcatcaatg
atggagtatgttctctattctttggacctttataacgacagcgcgcattacgcgcttact
aaatttaagaagcagttcctctatgatgagattgaggcagaggtaaacctgtgttttgac
caatttgtctacaagctggccgaccaaatatttgcatactacaaggcgatggctggcagc
ctgcttttggataaacgcttacgttcagaatgcaagaatcagggagcaagcattcagttg
ttacaatccaaccgctatgagacactgctgaaacaaagacacgtccaacttctcggtagg
tcgatagacctgaaccgactgatcactcagcgaatttcagcagctatgtacaggtcaatg
gagctggcgattggtcgatttgaaagcgaggatttgacttccattgtggagctggatggc
ttgatagaaataaacaaactgactcacaagcttctgagcagatacatgaccttggatagc
tttgatgccatgttcagggaagccaatcacaacgtgtcagccccttacggacgaatcact
cttcatgtattttgggaactgaattatgatttccttccaaactactgctacaatggatcc
accaacaggtttgttcggaccgtgctgccgttttcccaggagtttcagagggataagcag
cccaatgcacagccccagtatctgtatggatcaaaggcactgaacctggcatattccagt
atctacagcaactacaggaattttgttggtccccctcactttaaagtcatctgcaggctt
cttgggtatcaggggattgctgtggtgatggaggagttgctgaaagtcgtcaagagcttg
ttacaaggaacgattcttcagtatgtcaagaccctaatggaagtgatgcctaagatctgc
aggttgccaagacatgagtatggttctccaggtatcttggagtttttccaccatcagctg
aaggacatcgttgaatatgcagagctgaagactgtctgcttccagaatttgcgggaagtg
gggaacgctgtcctgttctgcctgctcattgagcagagtctgtccctagaggaagtgtgt
gacctgttgcacgcagcgccgttccaaaacatcctgcccagagtgcacgtcaaagagggt
gaaaggcttgatgctaaaatgaagagactagaatcaaaatatgctccactacatttagtt
cctctcattgaaagactgggaacaccacagcaaatagcaatcgcaagggaaggggacttg
ctgaccaaagaacgcctctgctgtggcctgtccatgtttgaggttatcctgacaaggatc
cgatccttcctggacgaccccatctggcgtgggcccctgcccagcaacggcgtgatgcac
gtggatgagtgcgtggaattccaccgcctttggagcgcgatgcagtttgtctactgcatc
cccgtgggaacgcacgagttcactgtggagcagtgctttggagacggcttacactgggct
ggctgtatgatcattgtgcttttgggacagcagcgtcgcttcgatgtgctggatttctgc
taccacctgttgaaagtccaaaagcacgatggcaaagatgaagttataaagaatgtgcct
ttgaagaaaatggttgaaagaattcgcaagttccagattctgaatgatgaaatcattgct
attttggacaagtatttgaagtctggggatggagagagcacacccgtggaacacgtgcgc
tgcttccagcctcctattcatcagtcccttgccagcaactag

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