Oxyura jamaicensis (ruddy duck): 118161411
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Entry
118161411 CDS
T11549
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin-1
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118161411 (ATXN1)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
118161411
NCBI-ProteinID:
XP_035172636
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Position
2:complement(join(53054968..53055498,53063011..53064885))
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AA seq
801 aa
AA seq
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MKSNQERSNECLPPKKREIPATSLPSEVKPVLPNDNHRADNLAWLPSTPGGQSGLGARHR
PGGTSAEVGLQQGLHKPPAAGLDYSPPSAPRSVPAPTTLPTVYSPALSQSGTPVSPVQYT
HLQHTFQFVGPQYSGPYAGFIPSQLISPTANSATGAVAAATAVATTPSQRSQLEAYSTLL
ASMSGLSQQGHKVEPHLVRTPGLIAAGSPPPAQQNQYVHISSSPQSAVRNVSPPTIPVPL
HPHQTVIPHTLTLGPSSQVVVQYSDTSHFVTRDAPKKPESGRLQAMQAKEVLNGEIEKSR
RYGISPSADMGLVKAGNKPAPHHYETRHVVVHSGPAEYGARDSSGVRASVMVVPNSSTPT
ADMEVQQATNRETSPSALNDKGSLHLGKPAHRSYALSPQQALGHEGVKAVATLSPHTVIQ
TTHSASEQLPVGLPATAFYAGTQPPVIGYLSGQQQALGYPGGLPQHLVIPGTQPLLIPVG
SADVEPSGVAPAIVTSSPQFAAVPHTFVTTAVPKSEAFSAEPHTTQPAYQATMVQAQIHL
PVVQSIASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSST
VERIEDSHNPGIAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCS
KLSVGDVCISLTLKNLKNGSIKKGQPMDSASILLKHSKNDSLAGSRHRYAEQENGINQGS
AQMLAENGELKFPDKIGLPAAPLLTKTEPSKPPATRKRRWSAPETRKLEKSEEEPPLTLP
KPSFIPQEVKICIEGRSNVGK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgccgcccaagaagcgagagatcccc
gccaccagcctgccttcggaggtgaagccggtcctgccgaacgacaaccaccgcgcggac
aacctagcatggctccccagcacgcccggcggccagagcggcctgggggccaggcacagg
cccggggggacgtcggcggaggtgggcttgcagcagggtttgcacaagccgccggcggcg
gggctggactattccccgcccagcgcgcccaggtccgtgccggcccccaccacgcttccc
accgtgtactcgcccgcgctctcccagtccgggacccccgtctcccccgtgcagtacacg
cacctgcagcacacgttccagttcgtcgggccccagtacagcggaccatacgccgggttc
atcccctcgcagctgatctccccgaccgccaattcggcaaccggcgccgtggcggcggcc
acggctgtcgcaaccactccatcccagcgctcccagctggaggcttattccactttgctg
gccagcatgagcggcttaagccagcaggggcacaaagtcgagccgcacctggttaggacg
cccgggctgatcgctgcggggtctcctccgcccgcccagcagaaccagtacgtccacatc
tccagctctccccagagcgcggtcagaaacgtctctcctccaaccatcccggtccccctg
cacccccaccagacagtgatcccccacacgctcaccctcggcccttcctcccaagtggtg
gtgcagtacagcgacacctcgcacttcgtcacgagggacgcccccaagaagcccgagagc
ggccggctgcaggcgatgcaggccaaggaggtactgaacggcgagatagagaagagccgg
aggtacggcatttcgccctctgccgacatgggtctagtcaaagcaggcaataaaccagct
cctcaccattacgagaccaggcacgtggtggtgcactcaggccccgccgagtacggcgcc
cgggattcctcaggggtccgagcctccgtcatggtggtccccaacagcagcacgccgacg
gcggacatggaggtgcagcaggccaccaaccgagagacctctccctcagccctcaacgac
aagggaagcttgcacctaggaaagccggcccaccgctcctacgctttgtccccgcagcag
gccctgggccacgagggggtgaaggcggtggccacgctgtccccccacaccgtcatccag
acgacccacagcgcctccgagcagctccccgtcgggctgccggcgacggccttctacgcc
gggacccagccgccggtgatcggctacctgagcggccagcagcaagcgctggggtacccc
ggggggctgccccagcacctggtgatccccggcacgcagcccctgctcataccggtcggc
agcgccgatgtcgagccgtcaggcgtcgcgccggcgatagtcacctcgtctccccagttc
gcagcagtgcctcacacatttgtcaccaccgccgtccccaagagcgaggctttcagcgcc
gagccccacaccacccagcccgcctaccaggccaccatggtgcaggcgcagatccacctc
cccgtggtgcagtccatcgcctcccccgctgcggctccccccacgctgcccccctacttc
atgaaggggtcaatcattcagctggccaacggggagctgaagaaagtagaggacttgaaa
acagaagacttcattcagagcgcggaaattagcaatgacctgaaaatagactccagcact
gtggagaggatcgaagacagccataacccaggcattgctgtgatacagtttgcggttgga
gagcatcgcgcacaggtcagcgtggaggtcttggtagaataccctttttttgtatttgga
caaggctggtcatcctgctgccccgagagaaccagccagctctttgatttgccatgctcc
aaactctctgtgggggatgtctgcatatcgcttacgctcaagaacctgaagaacggctct
attaaaaagggccagcccatggactcagctagtatcttgctgaagcattcaaagaatgac
agtctagctggaagtagacacaggtatgcggagcaggaaaatgggattaatcagggaagt
gcacagatgttagctgagaatggtgaactgaagtttccggacaaaataggattgcctgca
gcacctttgctcaccaaaacagaacccagcaagcccccggcaacgaggaagaggaggtgg
tcagcccccgaaacacgaaaactagagaaatcagaagaggagccacctttgactcttccc
aagccttcttttattcctcaggaggttaagatttgcattgaaggtcgatccaatgtagga
aagtaa
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