KEGG   Oxyura jamaicensis (ruddy duck): 118161455
Entry
118161455         CDS       T11549                                 
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
  KO
K20493  leucine-rich repeat-containing protein 16
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118161455 (CARMIL1)
Membrane trafficking [BR:oja04131]
 Others
  Actin-binding proteins
   Nucleation-promoting factors (NPFs)
    118161455 (CARMIL1)
SSDB
Motif
Pfam: CARMIL_C Carm_PH LRR_6 IL34 Spectrin_5
Other DBs
NCBI-GeneID: 118161455
NCBI-ProteinID: XP_035172737
LinkDB
Position
2:complement(join(96291628..96291764,96294487..96294633,96296872..96297006,96299595..96299825,96302004..96302082,96306276..96306708,96307969..96308075,96312257..96312453,96312775..96312841,96316882..96316899,96329412..96329561,96332884..96332971,96335023..96335198,96339257..96339388,96339645..96339773,96342596..96342694,96345006..96345099,96349465..96349533,96351993..96352165,96357473..96357527,96357615..96357714,96359079..96359160,96361541..96361552,96363788..96363857,96368696..96368800,96369705..96369781,96369873..96369950,96371959..96372062,96375521..96375607,96379592..96379686,96383281..96383369,96385578..96385653,96390619..96390692,96390827..96390897,96391262..96391359,96393126..96393247,96395597..96395656,96399546..96399596,96470182..96470279,96473800..96473839))
AA seq 1434 aa
MAEESSELPRELIESVRDVIGRKIKISVKKKVKLETKGDKVENKILILASCRAFLLTSRI
PTKLELTFSYLEIQGVTSCKPGQLIMETEKCSISMKMASSEDVNEVLAHIGTCLRKIFPG
LSPVRIMKKVTMEPSERLTNLQALWDSQTVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALAHNPNSGLHTINLASNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIANTLVYLDLSGNALRGDDLSSLYNF
LAQPNALVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTLFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEVSLDLSSCELGHCLRSGGAQVLEG
CIAEIRNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLV
QMIQDEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQ
INTKLRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQK
IENYLLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQED
VKSAERLMRDAKNSKTLLPNLYHLGGASWAGANGSLSNPIQETLESMAGEVTRVVDEQLK
TLLESMVDAAENLCPNVMKKAHIREDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISE
VKLTVASFLSDRVVDEILDALSHCHHKLADHLTRRGKALPQQESLEIELAEEKPTKRSII
TVEELTEVERLEDLDTCMTLCCTSMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVP
IHIEDPPFPSSRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQAAVSAGVPPE
GDQNGLMGRVDEGVDEFFTKKVTKMDTKRPSTKCSDGSEPSEAGDEKKKRDSRKSGFLNL
IKSRGSKSERPQTVVVAEEPSSPKVAAKSPAVDTNKKEPKPAEQNGGTERSEELKTPDSL
EEAQPDDAAKAERGDSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRAASAQKKLGNDTAS
RESSDTAMSSERLDGSGTVPKLQQTLPESRFASNKGDSVSASSEKNAKAEPKAEAAAKAR
GSSNTTSPKPPLQSAKPSLAGRPTVPQKPRSASRTEDAPESPSGPSSPKVALLPPVLKKV
PSDKEKDGQSSPTIRSFSQEEQTGDGQKRDADRDRAKPPGGGGAAAGQCSASAEEEGSEL
GQRKAQPAPAAKRSPGQQSHEFQELKQRSLSKDGHQGSKSSDSGEEADKDFIFV
NT seq 4305 nt   +upstreamnt  +downstreamnt
atggccgaggagagctccgagctcccccgggagctgatagaaagtgtcagggatgttatt
gggaggaaaatcaaaatttcggtcaagaagaaagtaaagctggaaacgaagggagataaa
gtggagaacaaaatattgattttggcatcatgtcgggcatttcttctaacatctcggatt
cccaccaagttagaactaactttcagctacttggaaatccaaggagtgacttcctgtaaa
cccggtcagctgatcatggaaactgagaaatgcagcatctccatgaagatggcgtcctca
gaggatgtgaacgaggtgctggcacacatcggaacctgcctcaggaagatattccctgga
ctctctccagtgaggattatgaaaaaagtaactatggaaccctcagaaagactgactaat
ctccaggccctgtgggacagtcagacagtggcagaacttggaccttgtggaggcttttcg
cagatgtatgcatgcgtgtgtgattggcttggatttccctacagagaagaagtacaatgg
gatgttgacacaatttatctgacacaagatacaagagagttgaatttgcaagacttcagc
catcttgaccacagagacttaatacctatagttgctgctctggagtataatcagtggttt
acaaagctgtcctccaaggatctgaaattatccactgatgtctgtgagcagattctgcga
gtggtgagtaggtccaatcgattggaagaactggtattagagaatgctgggcttagaaca
gattttgcacagaaactggcaagtgccctagcccacaatcccaactcaggactccataca
atcaaccttgctagcaatccgcttgaagaccgaggtgtatcatctttaagcatccagttt
gccaaacttccaaagggactgaaacatttaaatttatctaaaacctctttgtcacctaaa
ggggtgaatagcctttcccagtcactgagtgccaactcactgatagcaaacacgctcgtc
tatcttgacctctcagggaacgctctccgtggggatgatctctcaagcctgtacaatttt
ttggcccaaccaaatgcccttgtccatctggatttatccaacacggagtgtgctctagat
atggtgtgtggagccctccttcgtggatgtcttcagcatctagctgtccttagcctctct
aggacgcttttttctcacagaaaaggaaaagaagttcctccctccttcaaacagtttttc
agcagctcacttgctttgatgcagattaatctgtcaggaacaaaactccctcctgagcct
ctaaaagcgcttttattaggcctggcttgcaatcacaatctgaaggaggtgtctttagat
ctcagtagctgtgagcttggtcactgtttaagatcgggaggtgcacaagtcttggaagga
tgcatagcagaaatacgcaatatcaccagcctagatatttcagacaatggcctagaatct
gacctctcaacccttgtagtctggcttagtaaaaaccgatcgataaggcacttggcatta
ggcaaaaactttaacaacatgaaatccaaaaatctcactccagtacttgataatttagtt
cagatgattcaagacgaggattcacctctgcagtcattgtccctcgcagattccaagctg
aagactgaggtcaccatcattattaatgctttgggcagcaatacctctcttactaaagtg
gatattagtggaaatgccatgggagatatgggagcaaagatgctggcaaaagccctgcag
ataaacaccaagctcagaactgtaatatgggacaagaataacatcactgcgcagggcttc
caggacatagctgtggcactggaaaagaattatactttgagattcatgcctatacctatg
aatgatgcttcccaagcactcaaaactaaccctgagaaaacagaagaggcactgcaaaag
atagaaaactacttgcttcgtaatcatgagaccagaaagtacctacaagagcaagcatac
cggttgcagcaaggcattgtgactagtaccactcagcagatgattgacagaatatgtgtt
aaagtgcaagatcatctcaactctttaagaaactgtggtgtggatgctgttcaggaagat
gtcaaatctgcagaaaggcttatgcgagatgctaagaactccaaaacactcttaccaaat
ctgtaccacctcggtggggcttcttgggcaggagccaatggttcactctccaatccaatc
caagagactcttgaatccatggctggagaagtcacaagggttgtggatgagcagcttaag
acgctccttgaatccatggtggatgcagcggaaaacctttgtccaaatgtaatgaagaaa
gctcatatccgtgaagacctgatagaggccagcactgagaagatttccatcccacgcact
tttgtgaaaaatgtccttttggagcaatctggaattgatatcctcaataaaatcagtgaa
gtaaagttgacagtggcttctttcctgtctgaccgagttgtggatgaaattctggatgca
ctttcccactgccatcacaaactggctgaccatttgaccagacgtggcaaagcgcttcca
cagcaggaatcactggaaattgagttagctgaagaaaaaccaactaaacgctcgatcatc
acagttgaggagctgacagaggtagaacgtttagaggatctggacacctgtatgactctc
tgctgtacaagtatgactcctaagtcaaaacggaaaagcatccacagccgaatgctccgg
ccagtgtccagagcttttgaaatggaatttgatctagataaagcactggaagaagtacct
atccatatagaagacccaccgtttccttccagcaggccagacaaacgaacttctggattc
atttcagagctgccatcagaagaagggagaaaactcgaacacttcacaaaattaaggccc
aaaaggaataaaaagcagcagcccagccaagcagcagtatctgctggagtgcctccagaa
ggggatcagaatggtctcatgggaagagtggatgaaggtgtggatgaatttttcactaag
aaagtcacaaaaatggatacaaagagaccgtcgactaaatgttcagacggcagcgagccc
agtgaagcaggcgatgagaagaagaaaagggactcgaggaagagtggcttccttaactta
atcaaatcaagaggctccaaatccgaacgcccccagactgtggtggtggctgaggagccc
tcctcacccaaggttgctgcaaaaagcccagccgtggatacaaataagaaggagccgaaa
cctgcagagcagaacggcggtacggagcgatccgaggaattgaagacgccagactcgctg
gaggaggcacagccagatgatgctgcaaaggctgagaggggtgacagcaaaggaagccct
caaggaggccggaggtatggcgtgcaggtgatgggcagtggacttctcgcagaaatgaaa
gccaagcaggagaagagagcagcctctgctcagaagaaacttggaaatgacacagcttcc
agggagtcttctgacacagcgatgagctcagaacgattggatggaagtggtacagtgcct
aaactccagcagacccttccagagagccggtttgcctccaataaaggtgactccgtctca
gcatcatcggaaaaaaatgcaaaagctgaaccaaaggcagaagctgcagcaaaagcaaga
ggttcttccaatacgaccagccccaaacccccactgcagtctgcaaagcccagcctggca
ggacgacccacagtgccacagaaaccacgctctgcctctcgtaccgaggatgctccagag
tctccctctggccccagttcccctaaagttgccctgcttccacctgtgctgaagaaggtt
ccttctgacaaagaaaaggatggtcagagcagccccacaatcagatcgttttctcaagaa
gagcaaacaggagatgggcaaaagagggatgcagaccgtgaccgcgcaaagccgcctggc
ggagggggagccgctgcggggcagtgttctgccagtgcagaagaggaaggcagtgagctt
gggcagaggaaggcacagccagctcctgctgcaaaaagaagccccgggcagcagtcccac
gagttccaggagctgaagcagaggtccttgagtaaagacggccatcagggaagcaagtcc
agtgactctggcgaagaagcagataaagattttatttttgtttag

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