KEGG T11549: 118161690

Oxyura jamaicensis (ruddy duck): 118161690

Entry

118161690         CDS       T11549

Symbol

SNX13

Name

(RefSeq) sorting nexin-13 isoform X1

K17925

sorting nexin-13

Organism

oja Oxyura jamaicensis (ruddy duck)

Brite

KEGG Orthology (KO) [BR:oja00001]
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:oja04990]
    118161690 (SNX13)
Domain-containing proteins not elsewhere classified [BR:oja04990]
Phox homology (PX) domain-containing proteins
  Sorting nexins
   118161690 (SNX13)

SSDB

Motif

Pfam:

PXA Nexin_C PX RGS Rep3_C BLOC1_2 DUF4381

Other DBs

NCBI-GeneID:

118161690

NCBI-ProteinID:

XP_035173138

LinkDB

Position

2:complement(join(31584539..31584786,31585306..31585418,31586542..31586610,31588275..31588420,31590583..31590654,31591589..31591750,31592455..31592565,31593463..31593570,31595345..31595517,31598045..31598114,31601658..31601695,31604330..31604462,31605297..31605401,31606946..31607139,31608010..31608109,31609249..31609337,31610165..31610303,31613033..31613116,31613482..31613570,31614226..31614327,31614470..31614591,31616892..31617013,31617410..31617499,31621519..31621621,31626456..31626568,31646081..31646092))

AA seq 968 aa
MLAETSLSIWGWGSLGVVLFLITFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAVGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
GSINLSLDDLSNVPSDETVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRRN
QNSEETWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
LPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLIQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHTQLNKRMVYVFLERFLETLFPQNKFHELFNKLHSRSKQMQRYKQRLHTT
QAPSLQKR

NT seq 2907 nt +upstreamnt +downstreamnt
atgttagcagagaccagtctttccatatggggatggggaagtcttggtgttgtgcttttt
ctaataacttttggaccctttgctatattttactttgcattttatatcctctgcttcgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaactcagaaaaataccttgag
cagtgtgaacattcatttcttccttgtacatcagttgggatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaatataatt
gatgagcctttgcaacaggtaattcagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgatgaatcgtttcttctggaaatcaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttacttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaacgaatagca
gagaaaggtgatcagatgaaagaccaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgacctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgagggattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagagttggaagcagtgaaagataaagcaagtgaagaactgcaatatcttcgatctcta
gatacagcgggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacaattttttatggattacatgcagcagactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacggcacagcaacagctggaggtactt
caaagccggcaaaaagatggaaagcatcaaactaatcaaaccaagggtctattaagagca
gctgcggttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaactggcagaaactctgaaccatgaggatccaacacctgaa
atctttgatgacattcaaagaaaggtttatgaattgatgctgcgagatgaaagattctac
ccttcattcaaacagaatgtattgtatgtgcgcatgttagctgagctggatatgctgaag
gatcctagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
ggcagcataaatctgtccttagatgacctttcaaatgtcccttctgatgagacagttcaa
ctccatgcatacatctcagacactgtctatgctgactatgacccatatgctgtggcaggc
gtgtgtaatgaccatggcaagacatatgcactgtatgctatcacagtccatcggcgaaat
caaaacagtgaagagacatggaagacgtatcggcgttacagtgacttccatgactttcac
atgaggatcactgagcagtttgaaaatctggcaaacatactgaaacttcctggcaaaaag
acatttaacaatatggacagagaattcttggaaaagaggaaaaaagatttaaatgcatat
ttgcagctcctgttaaatcctgaaatgatgaaagcttctccagctctagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggagattttgcacggaagatg
gacacatttgtaaacccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
ctccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgcctcctttgatccaaaaa
acctattcagatcctgaccattgccgtgttgcagcaccaattgatgacaatgtggatgac
aatatcccgcttagagtaatgcttctcctgatggatgaagtctttgatttaaaggaaaga
aatcagtggttaagaagaaatataaaaaatctgcttcaacagcttattagagcaacatat
ggtgacacaattaacaggaaaatagttgatcatgttgactggatgacatctcctgaacaa
gtagcagatgctgtaaaacgcttcagagatgctttttggcccaatggcattttagcagag
actgttccgcggagagacaaagctattagaatgagaacaagagtagcagggaagaccaaa
ttactggaggtaatgccagatgaactgaagcacatcataggcgctgagactactcgaaaa
ggcattcttcgggtctttgaaatgttccagcacactcaattgaataagagaatggtgtat
gtctttctggaaagattcctagaaaccttatttccacagaataagttccatgagctcttc
aacaaactgcattcacggtcaaagcagatgcagaggtacaaacagagactacacactact
caagcgccttccttgcagaaaaggtga

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