Oxyura jamaicensis (ruddy duck): 118161860
Help
Entry
118161860 CDS
T11549
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118161860 (TRAPPC8)
Membrane trafficking [BR:
oja04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
118161860 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118161860
NCBI-ProteinID:
XP_035173443
LinkDB
All DBs
Position
2:complement(113453341..113504024)
Genome browser
AA seq
1471 aa
AA seq
DB search
MAQCVQSVQEFLQDSFVPLVAALCSEEAERLARRNNLGFAELLKPFCRLTSEVHMRDPNN
QLHIIKNLKIAVNNIITHPPQPSAIRKLLNEVVSVSQPAEGLVANVITAGDYDLNISDRS
VKASVPWYSNWKETLMELNTSTFYSATTPWFESYRECFLQSMPASDHEFLNHYVACMLVV
SSSEPEPVEQFLKLSQEQHRIQHSSEYMYPKWFIPNTLKYYVLLHDVSTGEEQRADTIYE
EMKQRYGTQGCYLLKINSRVSNRGTDEQIPDPWSQYLQKNTIQNQDCYEDCYAVISNKNT
DQLISDGLDNEIKDGISNNFKTHPLQLDHPSGSLDSTDYLKATTSLQESKKLNSGMPHGA
CLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKV
PEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLNDQAMLY
AAGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAEILKSQSK
YSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKK
HALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILINDSKQPPAQ
QGAFLREYLYVYKNVTQLSPDGPLPQLPLPYINSSATRIFFGHDRRPAEGEKQAATHVSL
DQEYDSESSQQWKELEEQVVSVINKGVIPANFQPTQFCLNRYSDNSRFPLAVVEEPVTVE
VSFRNPLKVPLLLTDLSLLWKFQPKDFSAKHDEVKEPGKCDDDMIGTEAIAEFLINSEET
RVARLKLFPHQTGELHILGVVYNLGTVQGTVTLDGIDPAIGLQEGKFVSNGLSVRGRQDL
EIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEIRKAYVEFV
NVSKCPLTALKVVSKHPEFFTFGANTAVLTPLSPSASENCSAYKTVVTDPTSVRTALLSS
ASSVDFGVGTGGQPEVIQVPLPDSVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKR
HSKMSHRVLRHTAVICTSRSLHIRATVCRSNALEDDEGRGDNMLVFVDIENINTSEAGVK
EFHIVQVSSNSKHWKLQKSVNISEDKDTKLASREKAKLCFKAVRCKNSEENYTFADIVFG
NEQIISSASPCADFLFQSLSSELKKAHVQSHTHGSQRAVKPSFDEAVRLVQRCSEVDLNV
VVLWKAYVVEDNKQLILEGQHHIALNTVGKEAFSFPQKQGFKKILGSSDWEDLEQELPEM
ALLKFFRPESTPGPARPTPEQLSNLIKTSLHYPESFSHSFHQKSLCLVPVTLLLSNCSQA
VVDVMIDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEVYSLQLKACFVHTGVYNLGT
PRVFAKLADQVTLFETSQQNSMPALIIINNI
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtgcagtcggtgcaggagttcctccaggactcgttcgtgcccttggtg
gccgcgctgtgcagcgaggaggcggagcgcctggcccgcaggaacaacctcggcttcgcc
gagctgctcaagcccttctgccgcctcacctccgaagttcacatgagagatcccaataat
cagcttcatataattaaaaatctgaagattgctgtcaacaacattattactcacccacct
cagcccagtgctattcggaagcttttgaatgaagtggtgtccgtcagtcagcctgctgaa
ggactggtagctaacgtgatcacagctggagattatgatctcaacattagcgatcgctca
gttaaggctagtgttccttggtacagtaattggaaagagacactgatggaactgaacaca
tccacgttttattcagctactactccttggtttgagtcttacagagagtgctttcttcag
tccatgcctgcatcagatcatgagttcttaaaccactatgttgcatgtatgctcgtagtt
tcttctagtgaaccagagcctgtggagcaattcctgaagctgtctcaagaacaacataga
attcagcatagtagtgaatatatgtatccaaaatggtttataccaaacacgctcaaatac
tatgtattactgcatgatgtaagcacaggagaagagcaaagagctgacaccatttatgaa
gagatgaagcagaggtatggaactcagggttgctatttgctgaaaataaattcgcgggtg
tctaaccgaggaacagatgaacagataccagatccttggagccagtaccttcagaaaaac
actatccaaaaccaggattgctatgaagattgttatgctgtcatttcaaataagaatacc
gatcagttgatatcagatggcttagataatgaaattaaagatggcatctcaaacaacttc
aagactcatcccttacaactggatcaccccagtggcagtttggatagcactgattacttg
aaggctactacatcattgcaggaatcaaagaaattgaactccggaatgcctcatggtgct
tgtttaacactcacagatcatgatcgaattaggcagttcatacaggaatttacatttagg
ggacttttgccacatatagagaagactatacggcaactcaatgatcagttaatatccagg
aaaggcttgagtcgatcattgttttctgccactaaaaaatggtttagtggcagtaaggtt
ccagagaaaagtataaatgaactgaagaatacttctggcttgctgtatccaccagaagca
ccagaacttcaaatccggaaaatggcagacttatgctttttggtgcaacactatgaactt
gcatatagctgttaccatacagcaaagaaagatttcttaaatgatcaggcaatgctttat
gcagctggagcgctggaaatggcagcagtatcagcttttcttcagcctggagctcctaga
ccttatcctgctcattatatggaaacagcaattcagacgtaccgagatatctgcaagaat
atggttctagctgaacgctgtgtacttctcagtgctgaaatcttaaaaagtcaaagcaaa
tattcagaggcagctgctcttctgattcgtttaaccagtgaggattcagatcttcgtagt
gcacttctgttggagcaggcagcacactgctttataaacatgaaaagtcccatggttaga
aagtttgcatttcatatgatattagcaggccacaggtttagtaaagcaggacagaaaaaa
catgccttacgttgctactgtcaagccatgcaggtttacaaggggaaaggttggtctctt
gcagaagatcatattaacttcactattggtcgccagtcctttacgcttcgtcagcttgat
aatgctgtgtctgcattcaggcatattttgatcaatgatagtaaacaacctccagctcag
caaggagcttttttaagagagtatctttatgtttataagaatgtaacccagctgtcacct
gacggtcccttaccacagcttcctttaccatatattaacagttcagcaacccgtattttt
tttgggcatgatcgaagaccagcagaaggtgaaaagcaggcagcaacacatgtaagtctg
gatcaggagtatgactcggagtcatcacaacagtggaaggaacttgaggagcaggttgtt
tctgtgatcaacaaaggagtaataccggcaaactttcaaccaacacagttctgcttaaat
cgctattcagataactccagatttccccttgctgtggtagaagaaccagtaactgtagaa
gtctctttccgaaacccattgaaagttccgcttttgttgactgacctttcgttgctgtgg
aaatttcaacccaaagacttcagtgctaaacatgatgaagtaaaagagccgggaaaatgc
gatgatgatatgataggaactgaagcaatagcagaatttctgattaatagtgaggagaca
agagtggcaagactaaagctctttccccatcaaacaggggagctacatattctgggagtc
gtttataatcttggcactgttcagggtactgtgacattagatgggatagatcctgctatt
ggattacaggaaggaaagtttgtctccaatgggttatctgtacgaggacgacaagactta
gaaatccaggggcctcgacttaataacacaaaagaagaaaaaacatcaattaagtatgga
cctgatcgacgtttagatcccattattacggaagaaatgcctttgttggaggtgttcttt
ataaactttcctacagggcttctctgtggagaaatcagaaaagcgtatgtggaatttgtg
aacgtaagcaagtgtcctcttactgcgctgaaggttgtgtccaagcatccagaatttttt
acttttggtgcaaatactgcagttctaacgccactaagtccttcagcttctgaaaactgt
agtgcttacaagactgttgtgacagatcctacctctgtgcgtacagcactgctatcttca
gcttcttctgtagactttggggttggcacaggaggtcaacctgaggtaatacaagtcccg
cttcctgactcagttcttcttcctggggcatcagtgcagctgccaatgtggttacgagga
ccggatgaagaaggtgttcatgaaataaactttttattttactatgaaagtgttaaaaga
cactcgaaaatgagtcatagagtattaaggcacactgcagttatttgtactagtcgatct
ctacatattcgagctactgtctgcagaagtaatgcacttgaagatgatgaaggcagaggg
gacaacatgttggtgtttgtggatatagaaaatatcaatactagtgaggctggtgttaaa
gaatttcatatagttcaagtttcaagtaatagcaaacactggaagcttcaaaaatctgtt
aacatctctgaagacaaagatactaaacttgctagcagagagaaagcaaagttgtgcttt
aaagcagtaagatgcaaaaactcagaagaaaactacacatttgcagatattgtctttgga
aatgagcagataataagttcagctagtccttgtgcagactttctttttcaaagcttatcc
tctgaattaaaaaaagcgcatgtgcaatctcatactcatggatctcagagggcagtgaaa
ccatcatttgacgaggcagtcagattggtacaaagatgcagtgaagtggacttgaatgtt
gttgtactgtggaaggcatatgttgtggaagacaataagcagcttattttggaaggccag
catcatattgcccttaacacagttgggaaggaggctttttcgtttcctcagaagcagggt
tttaaaaaaatactcgggagttctgattgggaggacttggaacaggagttaccagaaatg
gctctcttaaagttctttcgaccagaaagtacaccaggacctgcaagaccaacaccagag
cagctttccaatcttatcaagacgagtcttcattacccagagtctttcagtcactctttt
catcaaaaaagcctctgtctggtgcctgtcactctcctactttccaattgttcccaggct
gttgtagatgtgatgattgatttgcggcataaaacaacaagcccagaagcactagaaatc
catggatcttttacgtggcttgggcaaacacagtacaagcttcaactgaaaagccaggaa
gtctatagcttgcagctaaaagcttgctttgttcatacaggtgtctataatcttggaacc
cccagagtatttgccaagctagcggaccaagttactttgtttgaaacgagtcagcagaac
tccatgcctgcactgattattattaataacatctga
DBGET
integrated database retrieval system
