Oxyura jamaicensis (ruddy duck): 118161920
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Entry
118161920 CDS
T11549
Symbol
CTHRC1
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oja03037
]
118161920 (CTHRC1)
Cilium and associated proteins [BR:
oja03037
]
Other cilia and associated proteins
Stereociliary proteins
118161920 (CTHRC1)
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Paralog
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GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
118161920
NCBI-ProteinID:
XP_035173584
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All DBs
Position
2:join(138067601..138067723,138070230..138070451,138071293..138071509,138072242..138072384)
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AA seq
234 aa
AA seq
DB search
MLRAPLLLLALLLGSGPPPGGSEPPRGKQKALRQREVAADTYNGVCLQGPSGVPGRDGNP
GTNGIPGTPGIPGRDGLKGEKGECMRESVEESWTPNFKQCSWSALNYGIDLGKIAECTFT
KMRSNSALRVLFSGSLRLKCKNACCQRWYFTFNGAECAGPLPIEAIIYLDQGSPELNSTI
NIHRTSSVEGLCEGINAGLVDIAIWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgccccgctgctgctcctggcgctgctgctgggctcgggccccccgcccggc
ggctccgagcccccccggggcaagcagaaggcgctgcggcagcgggaggtggcggccgac
acgtacaatggtgtgtgcttacaaggccccagcggtgttcctggacgggatggaaaccca
ggaaccaacgggatccctgggacgccgggaatcccaggacgggacgggctgaagggggaa
aagggagagtgcatgcgggagagcgtcgaggagtcctggacacccaacttcaagcagtgt
tcgtggagtgcacttaattacggcatagatcttgggaaaattgcagaatgtacgtttaca
aagatgcgctcaaacagcgcgctccgagtcctcttcagcggatcgcttcggctaaaatgc
aaaaatgcctgttgtcagcgctggtacttcactttcaatggagcggaatgtgctgggcca
cttcctattgaagccataatatatttagatcaaggaagtccagaactgaattccactatt
aatatacaccgaacttcttcagtggaaggtttgtgtgaggggatcaacgccggcttggtg
gacattgccatctgggtcgggacttgcgccgattatccaaggggagatgcttctactgga
tggaattcagtctcccgtatcatcattgaagaactgccaaaataa
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