KEGG   Oxyura jamaicensis (ruddy duck): 118162096
Entry
118162096         CDS       T11549                                 
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
  KO
K08133  collagen type XIV alpha
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:oja00535]
    118162096 (COL14A1)
Proteoglycans [BR:oja00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   118162096 (COL14A1)
SSDB
Motif
Pfam: VWA fn3 Collagen VWA_2 Fn3_VIN3 Fn3_PBP1 VWA_3 Fn3_R-PTP-O
Other DBs
NCBI-GeneID: 118162096
NCBI-ProteinID: XP_035173941
LinkDB
Position
2:join(145370510..145370597,145376220..145376336,145379661..145379804,145383065..145383151,145405346..145405501,145406174..145406293,145407296..145407460,145407845..145408006,145409467..145409618,145410647..145410776,145414439..145414584,145415865..145415994,145419041..145419180,145420972..145421098,145421481..145421620,145425098..145425230,145427197..145427268,145428056..145428207,145433084..145433213,145434278..145434400,145435746..145435895,145436769..145436885,145438771..145438917,145441337..145441411,145442751..145442890,145443799..145443922,145445080..145445223,145447202..145447366,145448780..145448818,145449035..145449173,145451560..145451702,145453146..145453255,145454908..145455066,145460576..145460653,145460956..145461042,145464444..145464497,145464898..145464993,145466211..145466264,145467472..145467525,145475991..145476044,145478948..145479019,145480916..145480951,145481377..145481443,145481944..145482132,145490618..145490695,145491629..145491784,145493140..145493465)
AA seq 1888 aa
MPCWYEVQSCVLLAFLAVTIYSISDAQGQVSPPTRLRYNVVTPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQSYALQIIAFSDDQESKPAQGQFRIKDI
ERRKETSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIVASVGAPTDLV
TSEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSVSTTVLKNLMSLTEYQI
AVFAIYSNAASEGLRGTETTFALPMASDLQLYDVSHSSMRAKWNGVAGATGYMILYAPLT
EGLAADEKEIKIGEASTELELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPAN
LKFSDIGHNSAKLTWDPASKNVKGYRIMYVKTDGTETNEVEVDRVSTHTLTSLTSLTEYT
VAIFSLYDEGQSEPLTGSFTTKKVPPPQHLEVDEASTDSFRVSWKPTSSDIAFYRLAWIP
LDGGESEEVVLNGDTDSYVIEGLLPNTEYEVSLLAVFDDESESEVVAVLGATFAGTTTIP
TTVTTPSTTTPKPTIAVFRTGVRNLVIDDETTSSLRVIWDISDYNVQQFRVTYVTANGDR
AEEAVRTVMVPGRQNTLLLQPLLSDTEYKVTITPIYADGEGVSVSAPGKTLPLSAPRNLR
VSDEWYNRLRISWDAPPSPTMGYRIVYKPVNIPGPALETFVGDDINTILILNLFSGTEYS
VKVFASYSTGFSDALTGVAKTLYLGVTDLDAYQVRMTSLCAQWQLHRHATAYRVVLESLV
DGKKQEVNLGGGTSRHCFFELMPGTEYKISVHTQLQEIEGPAVSIMETTLPFPTQPPTSP
STTSPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIISFLYSTVGALDKIGPDGT
QVAIIQFSDDPRTEFKLNAYKTKETLLEAIQKIAYKGGNTKTGKAIKHAREVLFTGEAGM
RRGIPRVLVVITDGRSQDDVNKVSREMQLDGFTFFAIGVADADYSELVNIGSKPSERHVF
FVDDFDAFTKIEDELITFVCETASATCPLVTKDGNNFAGFKMMEMFGLVEKEFSAVEGVS
MEPGTFNVYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILN
EQYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAK
IVIDCKEVSEKTINAAGNISSDGIEVLGRMVRSRGPRDNSVPLQLQMFDIVCATSWANRD
KCCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGP
RGEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQ
GQRGLPGKDGPTGPQGPPGPVGIPGAPGVPGVTGSQGPQGDVGAPGAPGPKGERGERGDL
QSQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGE
QGSPGMQGFPGTPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPG
PPGSPGPRGPAGHTGPPGSQGPSGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNS
YQIYDPEDLYDGEQQPYVVHGSYPLPSPYSQSSYPSPHLAQPEFTPVREEMEAVELRSPG
ITRFTRKIAKRSVKTPVHKRANGKKPAQ
NT seq 5667 nt   +upstreamnt  +downstreamnt
atgccttgttggtatgaggtacagagctgcgtcctcttggcatttttagctgtcacaatt
tactccatcagtgatgcccagggccaagtgtccccaccaacaagactaagatataatgta
gtcactcctgacagtgtacagatctcttggaaagcccccaaagggcaattcactggatat
aagctgcttgtcactccaagttcaggtggaaaaacgaatcaactaattcttcaaaacaca
gctaccaaagcaattattcaaggtcttattccagaccaaagctatgcccttcagatcatt
gcattcagcgatgaccaggagagtaagccagcccaaggccagttcagaattaaagatata
gagagaagaaaagaaacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaaggaagcctgtttacctgtaaaactccagctattgcagatattgtg
attctagtagatggttcctggagtattggccgattcaatttcagacttgttcgactattc
ctggaaaatctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatcctcgcatcgaatggcatttgaatgcctatggcacaaaagatgcg
gtgttggatgcagtccgtaatctaccatataaaggagggaatacgctgacaggtcttgca
ttaacttacattttggaaaacagctttaagcctgaagcaggtgcgaggcctggggtatct
aaaatcggcatattgatcaccgatgggaaatcccaggatgatgttatccctcctgctaaa
aacctacgagatgctggcattgagctgtttgctattggtgtgaagaatgctgacataaat
gaactcaaagagattgcctctgaacctgacagcacacatgtctacaacgttgctgacttc
aacttcatgcatactattgttgaaggtcttaccagaacagtgtgctcacgagtagaggaa
caggaaaaggaaatcaaaggaacaattgttgcttcggttggggctcctacggatttggtc
acatctgaggtaacagctagaggattccgcgttagctggacccatgcaccaggcaaagtg
gaaaaatacagagttgtgtactatcccactcgaggagggcaaccagaagaggttgtggta
gatggaagtgtatcaacaacagttctgaaaaacctgatgtctttaactgaataccagata
gctgtatttgctatatactcaaatgctgctagcgagggccttcgtggaactgaaactaca
tttgccttgccaatggcatcagatctgcagttgtacgatgtgtcgcacagcagcatgaga
gctaagtggaatggagtagcgggtgccacaggttacatgatcctgtatgctcctctcaca
gaaggattggctgcagatgaaaaggagataaaaattggggaggcttccacagaacttgaa
ctggatggactattgccaaatacagagtatacagtcacggtttatgccatgtttggagaa
gaagctagtgatccccttacaggacaagaaactacactgcctctgagtcccccagcgaac
ttgaaattttcggatattggacataatagtgctaaactaacatgggatcctgcttccaaa
aatgtaaaaggctatcgcatcatgtatgttaaaacagatggaacggaaaccaatgaggtg
gaagttgatcgtgtttcaacacataccttaacaagtctgacatcccttacagaatatact
gttgctattttctccctgtatgatgaaggacaatctgaaccacttactggcagctttacc
acaaaaaaagttccacctccccagcatttggaagttgatgaagcatcaacagatagtttt
agggtcagctggaaacccacatcctcagatattgcgttttacagattggcatggattcct
ttggatgggggcgaatctgaagaggtggtcttgaatggagacacagacagttatgttatt
gagggcttgttgcccaacacggaatatgaagtttctttgctggcagtttttgatgatgaa
agtgagagtgaagttgttgctgttcttggagctacatttgcaggcactaccacaatacct
accactgtgactactcccagtaccacaactcctaagcccaccatagcagtttttcgaaca
ggagtcagaaaccttgttatagatgatgaaacaacctcaagtctgagagtgatatgggac
atttcagattacaatgttcagcagttcagagtgacctatgtcactgcgaatggtgaccgt
gccgaggaagcggtaagaacggtaatggtgcctgggagacaaaacactcttctacttcag
cctctgctgtctgatacagaatacaaagtcacaattactcccatctatgccgatggagaa
ggagtcagcgtctcagctcctggcaaaacattacccttgtctgctcccagaaatttacgc
gtctcagatgaatggtacaacagattacgtattagttgggatgccccaccgtcacccaca
atgggttacagaattgtctacaaacctgtaaacatccctggtcctgcgttggagaccttt
gtaggggatgatataaataccattcttattctaaatctcttcagtggaactgagtacagt
gtgaaagtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtagccaaa
accttgtacctgggtgtgacagatctggatgcatatcaagtccgcatgaccagtctctgt
gctcagtggcagcttcacagacatgctactgcatatagggtagttttagaatcgctcgtg
gatgggaaaaagcaagaggtaaatcttggtggagggacgtctagacattgtttctttgag
ctaatgcctgggaccgaatataaaatcagtgtccacacacagcttcaggagatagagggc
cctgctgtaagcatcatggagacaacgttaccatttccaactcagccaccaacttctcct
tcaacaacatctccaccacctacaatccctcctgcaaaagaagtgtgcaaagcagccaaa
gctgacctagcattcctggtggatgggtcatggagtattggagatgacaatttcaataaa
ataattagctttctgtatagcaccgttggagctttggataagattggccctgatggaact
caggtggcaataattcaattcagtgatgatcccaggacagaatttaaattgaatgcatac
aaaacgaaagagactcttcttgaggctattcagaaaatagcctacaaaggaggaaataca
aaaacaggcaaagccattaaacatgcaagagaagtcttgttcactggagaggcaggcatg
agaaggggcataccaagggttttggttgtcattactgatgggcgatcacaggacgatgtg
aacaaagtctccagagaaatgcaactagatggcttcaccttttttgctattggagtagcc
gatgctgactattcagagttagttaatattggcagcaagcccagtgaaagacatgtcttc
tttgtggatgactttgatgcctttacaaagatcgaagatgagctgatcacttttgtttgt
gaaactgcatcagcaacctgtccattggtaactaaagatggcaacaattttgcaggattt
aaaatgatggaaatgtttggcttggttgaaaaggagttttcagccgttgaaggggtttcg
atggaacctggtacatttaacgtttacccatgctacagactgcacaaggatgccctggtg
tcccaacctaccaagtatttgcatcctgaaggtctcccttctgactacaccattaccttt
ctatttcgcatacttcctgatacacctcaagaaccatttgctctttgggagattttaaat
gaacaatatgaaccactggttggagttattttagacaatggtggtaaaacactgactttc
tttaactatgactacaaaggagactttcaaactgtgacttttgaaggtcctgaaataagg
aagatattttatgggagttttcacaagttgcatgttgttatcagcaagactactgccaaa
atagttattgactgcaaggaagtgagtgagaagaccattaatgcagcagggaatattagt
tctgatggcatagaagtgctgggaagaatggtcagatcaagaggaccgagagacaactct
gtgccattgcagttacagatgtttgacattgtttgtgctacctcgtgggccaatcgagac
aaatgttgtgagcttcctggcttgagagatgaggaaaattgccctgcccttcctcatgct
tgttcctgttcagaagctaataagggtcctcttgggcctcctggaccaccgggtggccca
ggtgtcagaggtgccaaaggtcatcgtggagatccaggtccaaagggaccagatggacct
cgaggtgaaattggtgttcctggacctcagggacctccaggaccacaaggacccagtgga
ctttctattcaaggacttccagggccaccaggtgaaaagggagagaagggagatcttggt
tttcctggcctgcagggtgtcccaggagcctcaggttcacctggaagagatggagctcaa
ggtcaaaggggtcttcctggcaaagatggacccacaggcccacagggacctcctggccca
gtgggcatacctggtgctccaggtgttccaggtgttacaggaagccaggggccacagggt
gatgttggagctcctggtgctcctggacctaagggagaaaggggtgagcggggtgatctc
cagtcccaagcaatggtgcgtgctgttgctcgtcaagtgtgtgaacaactcatccagggt
catatggccagatataactcaatcctgaaccagattccaagccagtctgtctcaacacga
accattgcaggacctcctggggagccaggtcggccaggggctccagggcctcagggtgag
caaggatcaccaggcatgcaagggtttccaggaactcctggtcaaccaggaagaccagga
gaaagaggtttacctggcgagaagggagaaaaaggcaacccaggtgttggaactcaagga
ccccgaggcccaccaggatccacagggcctccaggagaaagccgaactggaagcccaggt
ccccccggctccccaggcccccggggccctgctggccacacgggaccccccggctcgcag
ggcccctccggccccccggggtactgcgacccttcctcctgcgcggggtacggcatggga
ggtggatacggtgagccaaccgatcaagacatccccgtagtgcagttgccacataactcc
taccaaatctatgaccccgaggacctttatgatggtgagcaacagccgtatgtagttcac
gggtcctaccccttaccgtccccatactcccagtcctcctatccatcacctcatcttgct
caaccagagtttactcccgttcgagaagagatggaagccgttgaactgagatccccggga
attactcgcttcacaaggaagatagccaagagaagtgtcaagactccagtacacaaaagg
gcaaatgggaaaaagcccgctcaatga

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