KEGG   Oxyura jamaicensis (ruddy duck): 118162498
Entry
118162498         CDS       T11549                                 
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
  KO
K22399  pachytene checkpoint protein 2
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118162498 (TRIP13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oja03036]
    118162498 (TRIP13)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     118162498 (TRIP13)
SSDB
Motif
Pfam: AAA_lid_TRIP13_C TRIP13_N AAA AAA_22 nSTAND3 AAA_16 AAA_14 AAA_18 Viral_helicase1 AAA_24 AAA_5 AAA_28 ATPase_2 NPHP3_N Cytidylate_kin IstB_IS21 AAA_25 RuvB_N TsaE bpMoxR RNA_helicase NACHT ABC_tran AAA_30 AAA_11 DUF815 AAA_17 AAA_7 AAA_33 TIP49 PduV-EutP ATPase SLFN-g3_helicase Zot Rad17 Mg_chelatase AAA_19 PhoH NB-ARC AAA_3 NTPase_1
Other DBs
NCBI-GeneID: 118162498
NCBI-ProteinID: XP_035174560
LinkDB
Position
2:join(66038510..66038601,66040362..66040527,66041312..66041441,66043290..66043345,66046045..66046135,66047783..66047855,66048699..66048762,66049036..66049122,66049902..66050008,66051059..66051212,66051397..66051509,66052721..66052790,66053348..66053443)
AA seq 432 aa
MDETAGDLKQELPNMCDNVQIHVEVHQNSISTAKKEDIRMSVLKLLNRHNIVFGDYKWTE
FDDGFLNSNVQSVSIVDTELKLKERQPIDLSKSSLSIHVFHLNEEGPSSENLEEDNEDIV
AANHWVLPAAEFHGLWESLIYDTEVKSHLLDYVTTTLLFSDRNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSYRYKYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELI
DDKDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVNAVLTQIDQIKRYPNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFRIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FVENNVSRLSLVLKEISRRSEGLSGRVLRKLPFLAHALYIQSPSVTMKTFLQALSLVVDK
QFEERRKLTDSV
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggacgaaactgctggggatttgaaacaagagctcccaaacatgtgcgataatgttcaa
atacacgtggaagttcatcagaattcaataagcacggcgaagaaagaagatatcaggatg
agtgtcctaaaactgttgaacagacataacattgtgtttggtgattacaagtggacagag
tttgacgatggtttccttaacagcaatgtgcagtctgtgtcaattgtagatacagagctg
aaactaaaagaaagacagcctattgacttgagcaaaagtagtctttctattcacgttttt
catctgaatgaagaagggccaagctctgaaaacctggaagaagataatgaggatatcgtt
gcagctaaccactgggtgctacctgcagctgaattccatggcctttgggaaagtcttata
tatgacactgaagtaaaatcacatttacttgattatgtgacaacaacattactattttct
gacagaaatgttgacagcaacctgatatcatggaacagagttgttttgctgcatggccct
cctggaactggtaaaacctctctctgtaaagcattggctcagaagctgacaatacgattg
tcgtacaggtataagtatggacagttaattgagataaacagccatagccttttctctaaa
tggttttctgagagtggcaagctcgtaaccaagatgttccagaagattcaggagttaatt
gatgacaaagatgctcttgtatttgtattgattgatgaggtggaaagcctcacagcagct
cgcagtgccttcaaggcaggcacagagccttcagatgctattcgagtggtgaatgctgta
ctgacacaaatagatcagattaaaaggtatcccaatgtagttatcctgactacttcaaat
attacggagaaaattgacatggcctttgtagacagggctgacataaagcaatatattggc
cctccatccactgcagcaatattcagaatatatctttcttgcttggaagagctgatgaag
tgtcaaataatataccctagacagcagctcttgacgctcagagagttagagatgattggc
ttcgtagaaaataatgtgtcaaggttaagccttgtattaaaagaaatctcaagaagaagt
gaaggtcttagtggccgggtcctgagaaagcttcctttcctagcacatgcactttatatt
caatcccccagtgttacaatgaaaacatttcttcaggctctttcacttgtagtagacaag
caatttgaagaaagaaggaaacttacagactctgtgtga

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