KEGG   Oxyura jamaicensis (ruddy duck): 118163376
Entry
118163376         CDS       T11549                                 
Symbol
STRN
Name
(RefSeq) striatin isoform X1
  KO
K17608  striatin 1/3/4
Organism
oja  Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:oja00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oja01009]
    118163376 (STRN)
Protein phosphatases and associated proteins [BR:oja01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     118163376 (STRN)
SSDB
Motif
Pfam: WD40 Striatin Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR75_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR41 ANAPC4_WD40 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_Vps41 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_SPT8 Beta-prop_WDR75_2nd PROPPIN SOGA1-2-like_CC
Other DBs
NCBI-GeneID: 118163376
NCBI-ProteinID: XP_035175782
LinkDB
Position
3:join(17288185..17288475,17300668..17300771,17307284..17307357,17310108..17310186,17312206..17312370,17323669..17323804,17325678..17325813,17329243..17329353,17331564..17331650,17332215..17332358,17336196..17336332,17340568..17340743,17341754..17341801,17342477..17342598,17343431..17343598,17345805..17345945,17348079..17348186,17349438..17349524,17349610..17349779)
AA seq 827 aa
MDEQAGPGVFFSNNNNNNALLLPPPAGGPGLEPGEAAAAGGGGSGGGGGGGVSGAAGPVP
ASRAQYSVPGILHFLQHEWGRFEAERAEWEAERAELQAQIAFLQGERKGQENLKKDLVRR
IKMLEYALKQERAKYHKLKYGTELNQGDMKPPNYDSDEGNETEIQPQQNSQLIWKQGRQL
LRQYLQEVGYTDTILDVKSKQVRALLGLSSDASEKENRNQEPMVNGTEGQIKENTMIGKP
ELTDSASLLETFKFLENAAADFSDEEDEEDIEGREKTIIDTATIVRKRVLSDSSEDRDTE
EALKEFDFLVTSDEGDGESRSSGDGTDWEKEDQCLMPEAWNVDQGVITKLKEQYKKERKG
KKGVKRKTTEDMFQPQSYIKQSKQGCGKMMEQSTGPNRSKLQDMLANLRDVDDLPSLQPS
VAPSSRPSSSRLIEHEINRTDEVEALTFPPSSGKSFIMGTDEALENELGLGELAGLTVAN
EADSLTYDIANNKDALRKTWNPKFTLRSHFDGIRGLAFHPVEPVLITASEDHTLKMWNLQ
KTAPAKKSASLDVEPIYTFRAHNGPVLCVVMSSNGEQCYSGGTDGLIHGWNTTNPNIDPY
DSYDPSVLRGAFVGHTDAVWGLVYSGTHQRLLSCSADGTIRLWKTTEIAPALNIFNDNQE
MGIPSSVDLVSSDPSLMVASFNTGHTSIFNMETRQRILTLESGVDTTVSSSCQINRVISH
PTLPISITAHEDRHIKFYDNNTGKLIHSMVAHLDAVTSLAVDPNGLYLMSGSHDCSIRLW
NLESKTCIQEFTAHRKKFDESIHDVAFHPSKCYIASAGADALAKVFV
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggacgagcaagcggggcccggcgttttcttcagcaacaacaacaacaacaacgcgctg
ctgctgccgccgccggccggcgggccggggctggagccgggagaggcggcggctgcggga
ggaggaggaagcggtggtggcggcggcgggggggtctccggtgccgccgggccggtgccg
gcgtcccgtgctcagtacagcgtgccgggcatcctgcatttcctgcagcacgagtggggc
cgcttcgaggcggagcgcgccgagtgggaggcggagcgggcggagctgcaggcccagatt
gctttccttcaaggtgaaaggaagggacaagaaaatctgaagaaggatctagtgcggaga
atcaaaatgctggaatatgcacttaaacaggaaagggctaaatatcataaattaaaatat
ggcacagaattgaatcagggagatatgaagccaccaaactatgattctgatgaagggaat
gaaacagagattcagccacaacaaaacagtcagctaatatggaaacaaggacggcagctg
ctaagacagtacctgcaagaagtgggctacaccgacacaatattggatgtgaagtcaaaa
caagtacgagctttattgggactttcaagtgatgcttcagaaaaggaaaatagaaatcaa
gaaccaatggtaaatggtacagagggccagattaaggaaaacacaatgattgggaagcca
gaattgactgactctgcctctctgctagagaccttcaagttccttgaaaatgcagctgca
gactttagtgatgaagaagatgaggaagatattgaaggaagagagaaaacaatcattgat
accgcaacaattgtaaggaaaagagtgctgtctgacagtagtgaagacagagatacagaa
gaagctttgaaagagtttgacttcttggttacctcagatgaaggtgatggggaatcaaga
agttcaggagatggaacagactgggaaaaggaagaccagtgtctcatgcctgaagcttgg
aatgtcgaccagggagtaataaccaaactcaaggaacaatacaaaaaggagcgcaagggg
aaaaagggggtgaagagaaaaactaccgaagatatgtttcagcctcaatcctatataaaa
cagtcaaaacagggatgtgggaaaatgatggagcaaagcacagggcccaacaggtcaaag
ctgcaagatatgcttgcaaacttgagagatgttgatgatctcccttcattacagccatct
gttgcaccttcttctaggcccagtagctcaaggctcattgaacatgagataaacaggaca
gatgaagtggaagctttaacattccctccttcttcagggaaatctttcattatgggaaca
gatgaagcccttgaaaatgaactgggtcttggagaactggcgggcctcacggtagccaat
gaggcagattcactgacttatgatatagcaaacaataaggatgcattgagaaagacttgg
aaccccaaattcacattaagaagccactttgatggaataagaggtctggcttttcatcca
gttgaaccagtattaataacagcttcagaggaccataccttaaaaatgtggaatttacaa
aaaacagccccagcaaaaaagagtgcttctcttgatgtagagccaatatataccttcaga
gcacataatggaccagtgctttgtgtggtgatgagcagtaatggtgaacagtgttacagt
gggggaactgatggcctcatccatggctggaatacaaccaacccaaacatcgacccctat
gactcttacgatccttctgttctaagaggtgcttttgtgggccacacagatgcagtgtgg
ggtctggtttacagtggcacacaccagcgtttgctgtcctgttcagcagacggcactata
cgtttatggaaaactacagaaattgctccagctctcaatatatttaatgataatcaagaa
atgggaatcccttcatcggttgatcttgtgagcagtgacccaagcctcatggtagcatca
tttaacactggacacacgagcatttttaacatggagacacgacaacgaattcttaccttg
gagtctggagtagatactacagtcagttcctcctgccagataaatagagttatcagtcat
ccaactcttccaattagtatcacggctcatgaagacagacacatcaaattctatgacaac
aatacaggaaaactgatccactccatggtagctcacttagatgcagttacaagtttagct
gttgatcctaatggcttatatttgatgtccggcagtcatgactgttcaattcgcttatgg
aatcttgaaagcaagacctgcatccaagaattcactgctcatcgcaaaaaatttgatgaa
tccattcatgatgtggcattccacccatccaaatgttatattgccagtgcaggagcagat
gccctggcgaaagtgtttgtatga

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