Oxyura jamaicensis (ruddy duck): 118163500
Help
Entry
118163500 CDS
T11549
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118163500 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oja03021
]
118163500 (TAF5L)
03036 Chromosome and associated proteins [BR:
oja03036
]
118163500 (TAF5L)
Transcription machinery [BR:
oja03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118163500 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
118163500 (TAF5L)
Chromosome and associated proteins [BR:
oja03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
118163500 (TAF5L)
STAGA complex
118163500 (TAF5L)
TFTC complex
118163500 (TAF5L)
SAGA complex
118163500 (TAF5L)
SLIK complex
118163500 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118163500
NCBI-ProteinID:
XP_035176034
LinkDB
All DBs
Position
3:complement(join(42346968..42347765,42353414..42354138,42356505..42356609,42360445..42360586))
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSEVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDSAGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgtacgcacagaacagattcagatggcggtgtcctgctacctcaaacgccgt
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgaatctggttgtgccaacgttgtgtctgca
gctccctgcctggcggagccacagcaatatgaagtacaatttggacgattacgcaatttt
ctcacagattcagattctcagcacagccatgaagtgatgcctcttctgtatcccctcttc
gtctacctccatctgaacatggtccagaatggcctgaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaacgccagccagaaggatatcattgagcagttg
cagactaccatgactattcaagatatcctgtccaacttgaagctccgggcttttctggac
aacaagtacgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcacattcacctggatgtgcag
cccgccaagaggaccgactaccagctctacgccggtgggagctcctcgcgcaacgagagc
aatggcctggaacccagcgaggtgccggcttccattctgcagaacgaggcagcgctggat
ctactgcaggacagcattaagcgcgtcaaggatgggcccccttccttaaccaccatctgt
ttctatgccttctataacacggagcagttgctgaacacggctgagatttcaccgaacagc
aagctgctcgccgctgggtttgataattcgtgcgtcaagctgtggagcctgcgttccagg
aagttaaaatctgagccccacctcgttgatgtgtcccgcatccgcctggcttgtgacatc
ctggatgaggaggaggaagaggatgacagcgcaggcacagaaatgaagatcctgagagga
cactgcgggcctgtgtacagcacgaggttcctttcggacagttcgggactcttatcttgc
tctgaggacatgtccatcagatactgggacctcggaagctttacaaacactgtgttgtac
caaggacatgcctaccccgtctgggatttggacatcagcccctgcagcctgtactttgcc
agcggttcccacgatcgcacggcgaggctctggtcgtttgatcggacgtacccgctgcgg
atatatgcaggccacttggcggacgtggactgcgtcaaattccaccccaactccaactac
ttggcgacgggctccacggacaaaaccgtgcgcttgtggagcactcagcaaggcaactcg
gtgcgtctgttcaccgggcaccgcggccccgtgctagcgctcgcgttttcccccaatggt
aagtacctggcctcggcgggcgaagaccagcggctaaagctgtgggacttggcttcggga
actctctacaaagaactgagggggcacacggacaacataaccagccttacttttagcccc
gacagtagtttaatcgcttcggcgtcaatggacaattctgtccgggtctgggacatccgg
aacacttactgcaacgcccctgcggatgggtcttccagtgaactggttggtgtatatacc
ggacagatgaataatgtactgagcgtacagttcatggcctgtaatcttcttctagtgact
ggaattgcacaagaaaatcaggaacattaa
DBGET
integrated database retrieval system
