KEGG   Oxyura jamaicensis (ruddy duck): 118163556
Entry
118163556         CDS       T11549                                 
Symbol
AFDN
Name
(RefSeq) afadin isoform X1
  KO
K05702  afadin
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04517  IgSF CAM signaling
oja04519  Cadherin signaling
oja04520  Adherens junction
oja04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118163556 (AFDN)
   04519 Cadherin signaling
    118163556 (AFDN)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    118163556 (AFDN)
   04530 Tight junction
    118163556 (AFDN)
SSDB
Motif
Pfam: RA AFDN DIL PDZ FHA PDZ_6 RA_3 RA_2 PDZ_2 RASSF8-10_RA Yop-YscD_cpl
Other DBs
NCBI-GeneID: 118163556
NCBI-ProteinID: XP_035176184
LinkDB
Position
3:complement(join(44500185..44500329,44500939..44501023,44505072..44505585,44507413..44507547,44511756..44511791,44513653..44514675,44517017..44517205,44517665..44517756,44518057..44518251,44519214..44519332,44519892..44519965,44520121..44520186,44540596..44540682,44541855..44541958,44543826..44544024,44547015..44547158,44547647..44547912,44550547..44550641,44553314..44553459,44554201..44554221,44558078..44558283,44559098..44559159,44566085..44566200,44568392..44568461,44571053..44571315,44572091..44572185,44578157..44578201,44579911..44580078,44580454..44580565,44585471..44585628,44586611..44586771,44588130..44588293,44589799..44589914,44591533..44591728,44626345..44626455))
AA seq 1925 aa
MSGGGGSREEERRKLADIINHWNANRLDLFEISAPTEDLEFHGVMRFYFQDKAAGNFATK
CIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNW
NKDDREGRFVLKNENDTLPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKRREKEAL
RQASDKDDRFLHGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEF
RSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDTADFAVIEALEKYGLEKENPKDYCI
ARVMLPPGAQHSDDKGAKESILDDDECPLQIFREWPSDKGILVFQLKRRPPDYVPKKSKK
TADGKPLKGKDRVDGSGYGSCLPPEKLPYLVELSPGRRNHFAYYNYHAYEDGSDSRDKPK
LYRLQLSVTAVGTEKFDENSIQLFGPGIQPHHCDLTNMDGVVTVTPRNIDAETYVEGQRI
SETTMLQSGMKVQFGSSHVFKFVDPTQDHIIPKRPIDASLMVKGPRHKTGAVQETTFDLE
GDVHSGTALPVSKSTSRLDGDRTSSASSTAERGMVKPMIRIEQQDYRRQDSRSQDTHGPE
LILPASIEFRESSEDAFLSAIINYTNSSTVHFKLSPTYVLYMTCRYVLSSQYRPDITPTE
RTHKVIAIVNKMVNMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRI
TVDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENNPQRPKIDDVLHTLTGAMS
LLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTAPDSGLCSHYWGAIVRQQLGHIEAWAE
KQGLELAADCHLSRIVQATTLLTMDKYSHADVPNINSTCFKLNSLQLQALLQNYHCAPDE
PLIPTELIENVVTVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNVPSG
LQEFLDPLCQRGFCRLIPHPRSPGTWTIYFEGADYESHLSHENAELAQPLRKEPEIITVT
LKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQ
ERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRVSDRRGSGKPRPKSEGFEL
YNNSTQNGSPESPQLPWTEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKNAYAS
GTTTKITSVSTGNLCTEEQTLPPRPEAYPIPTQTYTREYFTFPASKSQDRMGPAQSQWPN
YEEKPQVQAESNNSINSTMQRVARSQEELRDKVFQPDRNRLEVVIRKDVEYIDRKSDSDQ
WMNSSVDSSTSSQEHLNHSSKPVSPGSCLTKSGPGRWKTPATSQPTPVAISQPIRTDLPP
PPPPPPVHYAAEFDEPQMDLPLPPPPLPNQIGAQASSQVAAAERKKREEHQRWYEKEKAR
LEEERERKRREQERKLGQMRSQPLIPAQPVVPPVSLQQVKSEKPSTLQRPQETVIRELQP
QQQPRTIERRDLQYITISKEELSSSDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQDL
QNKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDDVDTMLIMQRLEAERRA
RQTAVPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERTRREAEEKRR
QEEEYYNRLEAERRRQHDEAERRLLEPDEPGLYRPPLPREYELPSPTPSSNAPPPPPQRN
TSYLKTQVLSPDTIYTAKFVAYNDDEEEEDSNLAGQDKYSGTRKSYGDFPPATLKPQQPS
RQPRPVSDGLFLSNSFQSSPVNANSTAAKKSHPPPPPNKPSFIHASSSKGINSYTGSTGA
TVGAHEVYRDPRDKRSKSQDTDLPGAPENLTFRERQRLFSQGQDVSNKVKASRKLMELEN
ELNTK
NT seq 5778 nt   +upstreamnt  +downstreamnt
atgtcgggcggcggcggcagccgggaggaggagcggcgcaaactcgccgacatcatcaac
cactggaacgcgaaccggctggacctgttcgagatcagcgcccccaccgaggatttggag
tttcatggagtaatgcgattttactttcaagacaaagcagctggaaacttcgcaacaaaa
tgtatccgtgtctctagtactgccacgactcaagatgtgatagaaactcttgcagagaag
tttcgaccagacatgcgaatgttgtcatcccctaaatactcactttatgaggtgcatgtc
agtggagaagaaagaagattagatgtagatgagaagcctcttgttgtacaattaaactgg
aacaaagatgatcgagagggaagatttgttctcaagaacgaaaatgatacgcttcctcct
aagaaggctcagagtaatggccctgaaaaacaagaaaaagagggagtaattcagaatttc
aaacgaactctctcaaaaaaagaaaaaaaagaaaagaagaggcgtgaaaaagaggcattg
cgacaagcatcagataaagacgatcgatttcttcatggggatgacattgagaattctcgc
cttgcagctgaggtttacaaagacatgcctgaaaccagctttactcgcacaatatctaat
cctgaggtggttatgaaacggcggcgacagcaaaaactagagaagagaatgcaggaattt
cgcagttctgatggcagaccagattcaggtgggacactgagaatttatgcagacagtttg
aaaccaaatataccatacaagacaatcctgctgtccactacagatactgcagactttgca
gttattgaagcactggagaaatatggcctggagaaggaaaatcccaaggattattgtatt
gctcgtgtcatgctgcctcctggtgctcagcactctgatgataaaggtgctaaagaaagt
attctagatgatgatgagtgtccacttcagatattcagggagtggcctagtgataaagga
atactagtatttcagttgaaaaggcggcctcctgattatgtcccaaagaaatccaagaaa
acagctgatggaaagccattaaaggggaaggacagagttgacgggtctggctatggctct
tgccttcctcctgagaaactaccatacttggtagaattaagcccagggagaaggaatcac
tttgcctactacaactatcacgcttatgaagatggttctgactccagagataaaccaaag
ctttatcgtctacaattaagtgtcactgcagttggaactgaaaagtttgatgagaattcc
attcagttatttggtccaggaattcagcctcatcattgtgacctcactaatatggatgga
gttgttactgtaactccaagaaacattgatgctgaaacatatgtggaaggtcagcgtatt
tcagaaaccactatgctgcaaagtggaatgaaggttcagtttggatcatctcatgtattt
aagtttgtggatcccactcaggaccatattattcctaaaagacctattgatgcaagtctt
atggtcaaaggtccaagacacaaaactggagctgttcaggaaaccacatttgatctagag
ggagatgttcacagtggaacagcattaccagtaagcaagagcaccagcaggcttgatggt
gacagaacatcatcagcatccagcacagccgaacgaggaatggtgaagccgatgattaga
atagaacagcaagattatcgcagacaggatagcagatctcaggatacccatggaccagaa
ctgatcctacctgccagtattgaattcagggaaagctctgaagatgcctttttatctgcc
attataaattacacaaatagctcaacagttcattttaagctgtcacctacgtatgttttg
tacatgacatgtcggtatgtattgtcaagccagtacagacctgacatcactcctactgag
cgtactcacaaagtcattgcaatagtcaacaagatggtgaacatgatggaaggagttata
caggaggtagaccaggttgatcagaaacagaagaatattgctggggcacttgccttttgg
atggcaaatgcatctgaattactgaatttcattaagcaagaccgagaccttagccgaatt
actgtggatgcacaagatgttttggcacacttggttcaaatggcattcaagtacctcgtt
cattgtctgcagtcagagcttaataactacatgcccgcattccttgatgatccagaggaa
aataatcctcagaggcctaaaatagatgacgtgctgcatacgttgactggagctatgtcc
ctgttgcgacgatgtagagtgaatgctgcgctgactatacagctcttctcccagttgttt
catttcatcaacatgtggctttttaacagattagtaacagccccagattcagggctgtgt
tcacattactggggagctattgttcgtcagcagttgggccatattgaagcctgggcagaa
aaacaagggttagaactggctgctgattgccacctaagcagaatagtgcaggcaaccaca
ttgcttacgatggacaagtactcacatgcagatgttccaaatattaacagtacttgcttt
aagctgaattctctgcagctacaagctttgttgcagaattatcactgtgctccagatgaa
ccgcttatcccaacagaactgatagagaatgtagtaactgtcgcagaaaatacggctgat
gaacttgctcgcagcgatggcagagaagtccagttggaagaggaccccgacttacagctg
ccttttcttttaccagaagatggctattcttgtgatgtagtcagaaatgttccaagtggt
ttacaagaattcttggatcctctatgtcagagaggcttttgtagactaatacctcatcca
cggtcaccaggcacatggacaatatactttgaaggtgcagactatgaaagtcacctgtca
catgagaatgctgagctagctcagcctttgaggaaagaacctgaaattataactgtaaca
ttgaaaaaacaaaatggaatgggcctcagcattgttgctgccaagggtgctggtcaagat
aaacttggaatatatgtcaagtctgttgtgaaaggaggtgctgcagatgtggatggtcgt
ctggctgcaggggatcagttgctcagtgtggacggtcgaagtttggtgggcctgtcccag
gaaagggcagcagaacttatgacaaggacaggttctgtagtaacactggaagtagcaaaa
caaggagcaatttaccatggtctggcaaccttgcttaatcagccatccccaatgatgcaa
agagtttctgaccgccgtggctcaggtaaaccccgaccaaagagtgaaggttttgagctg
tataacaactccacgcaaaatgggtcaccggagagccctcagctgccatggacagaatac
agtgaaccaaagaagctgccaggggatgatagattaatgaagaacagagccgatcatcgc
tccagccccaatgtagcaaatcagcctccaagccctgggggaaagaatgcttatgcatct
ggaactaccaccaaaataacctcagtctcgactggaaatctttgtacagaggaacagact
ctgcctccacgacctgaagcttatcccatcccaacacagacctatactagggaatatttc
acattcccagcttcaaagtcccaggatcgaatgggtccagctcagagtcagtggccaaat
tatgaagagaaaccacaggtccaggcagaaagtaataattcgatcaatagtacaatgcag
cgcgtggctcgttcccaggaagaactcagagataaagttttccagccagacaggaatcgc
ttggaagttgttatacggaaggacgtggagtacattgatcggaagtcagacagcgatcag
tggatgaattcatctgtggattccagcacctctagccaagaacacctgaaccattcatcc
aaaccagtttcgcctggttcttgtttaactaaaagtggacctggccgttggaaaactcca
gctacgagccagccgactccagtggccatttcccagcccatcagaacagatcttcctccg
ccaccaccacctcctccagtgcattatgcagctgaatttgatgaaccacaaatggatttg
cctctgcctccccctcctctgccaaatcagataggagcacaagcatcttcccaggtggct
gctgctgagcgtaaaaaaagagaagagcatcagaggtggtatgaaaaggaaaaggcacgt
ttggaagaagaacgagaaaggaagcgtcgtgagcaggagagaaaactgggccaaatgcgt
tctcagcccctaattcctgctcagcctgtggttcctcctgtttccctccaacaagtgaaa
tcagaaaagccttcaacgttgcagaggcctcaagaaacagtcattcgagagttgcagcca
cagcagcagcctcggactattgagcgcagagatcttcagtacattacaataagcaaggaa
gaactctcctctagtgacagcctctctccagatccctggaaacgggatgctaaggagaaa
ctggagaagcagcaacagatgcacattgtggacatgctgagcaaagagattcaggacctt
cagaacaagcctgatcgcacagccgaagagaatgaccgtctgcgcaaactcatgctggag
tggcagttccaaaagcggcttcaggagtcaaagcagaaggatgaagatgatgatgaagag
gaggatgatgatgtggatactatgctcatcatgcagcgactggaggcagaaagaagagca
aggcagactgctgtgccagcaatctctgttctagatttgttacaggacgaagaacgcaga
cggcagcagcagctggaagagatgcgcaagcgggaagcagaagacagagcccggcaggaa
gaagagcgccgacagcaagaggaggagcgaaccaggagagaggctgaagaaaagaggcga
caggaagaggagtattacaatcgcttagaggctgaaaggcgcaggcagcatgatgaagca
gagcggagattgctggaacctgacgagcctggtctgtacagacctccacttccacgggaa
tatgaactcccatccccaaccccttcatctaacgctcctcctcccccacctcagcgaaac
acctcttacctcaaaacacaggtcctctcccctgacacgatttatactgccaagtttgtt
gcatacaatgatgatgaggaggaggaggattccaatctagcaggtcaggataagtactcc
ggcacaagaaaatcttatggtgacttccctcctgccacccttaagccacagcagccctcc
cgccagcctcgcccagtttcagatggcctctttctttccaactcattccagtcatctcca
gtcaatgccaacagtactgctgccaaaaaaagccaccccccgcccccaccaaacaaaccg
agtttcatccatgccagcagctctaaaggaataaattcatacactggatctactggagca
actgttggggcccatgaagtttatcgggatccaagagacaaaagatctaaaagtcaagat
acagatttacctggagcaccagaaaacttgacgttcagggaacgccagcgacttttttca
cagggtcaagatgtatccaataaagtaaaagcctctaggaaactaatggaactggaaaat
gagttgaacacaaaataa

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