Oxyura jamaicensis (ruddy duck): 118163782
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Entry
118163782 CDS
T11549
Symbol
SMAP1
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118163782 (SMAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118163782 (SMAP1)
Membrane trafficking [BR:
oja04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
118163782 (SMAP1)
Endosome - Golgi transport
Arf GTPase associated proteins
118163782 (SMAP1)
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Paralog
GFIT
Motif
Pfam:
ArfGap
SR-25
EMC3_TMCO1
Mat89Bb
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
118163782
NCBI-ProteinID:
XP_035176626
LinkDB
All DBs
Position
3:complement(join(87793993..87794127,87796513..87796841,87797449..87797617,87805579..87805706,87813927..87814011,87835904..87835984,87840954..87841028,87855538..87855613,87858807..87858892,87859578..87859711,87881019..87881136))
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AA seq
471 aa
AA seq
DB search
MATRSCREKAQKQNEQHQAILAKLLREEDNKYCADCEAKGPRWASWNTGVFICIRCAGIH
RNLGVHISRVKSVNLDQWTPEQIQCMQEMGNTKARLLYEANLPENFRRPQTDQAVEFFIR
DKYEKKKYYDKNAVNTFNISSSDTAQPLTSSPLQAAAEKSKAEKEKEKKKEEKKREKESE
KTSKQVAVEKPQKKEDQQLEAKASPKKSSEPTIDLLGLDGPAEASVTNGGTATAAALNDD
LDIFGPMISNPLPAAALPPAQSASSKPTAATLSAASGDLDLFTEQTTKSEESAKKQLSKD
SILSLYGTGTMQQQNAPGMFMGSSSMPFTTQPSTHFQGFPAMGVPVPAATGMMGSMMGQS
VPVMGQSTGVMVGMGMPNGFTGTTQTGVMGLPQNVVGPQGGMVGQMVTPQNKYGLQQNQQ
AQWNLTQMNQQMAGMSLSSSSNVMGFGQPPSTVAGWTGSSSGQTLSTQLWK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgctcctgccgggagaaggcgcagaagcagaacgagcagcaccaggccatc
ctggccaagctgctgcgggaggaggacaacaagtactgcgcggactgcgaggccaagggt
ccaagatgggcttcctggaacactggtgtttttatttgcatcagatgtgctggaatacat
cgaaatcttggggtccatatatcaagggtcaaatctgtcaacctggaccagtggacacca
gaacaaatacagtgcatgcaggaaatgggaaatactaaagcaagactactctatgaagct
aacctcccagagaactttagaagacctcaaacagatcaagccgtggaatttttcatcagg
gacaagtatgaaaagaagaagtattatgacaaaaatgcagtaaataccttcaatatatcc
tcttctgatactgctcaacctttgacatcctctcctctgcaagctgctgctgagaagagc
aaagcagagaaggaaaaagaaaaaaagaaagaagagaaaaagagagagaaagaatcagaa
aaaacatctaaacaagtagcagttgaaaagccacagaagaaggaggatcagcaattagaa
gctaaagcaagtccaaaaaagtcatcagaacccactattgaccttctaggacttgatggt
ccagctgaagcatctgttacaaatggaggcactgccactgccgcagcattgaatgatgac
ctggatatcttcggtccgatgatctctaatcctttaccagcagctgctctacctcctgct
cagagcgcttccagtaaaccaacagctgccaccttgtctgcagcatccggggatctcgat
ctgttcactgagcaaacaacaaaatcagaagagtcggcaaagaaacagctctccaaagac
tccatcttatcgctgtatggcacaggaaccatgcagcagcagaatgctccaggtatgttc
atgggctcgtcctctatgccatttaccacacaaccgtcaactcattttcaaggttttcca
gccatgggagttcctgtgcctgcagcaactggaatgatgggaagcatgatgggacaatcg
gtgccagtcatgggacagagcacgggtgtgatggtaggaatgggaatgcccaatggattt
actggtactacacaaactggtgtgatgggacttcctcagaacgtcgttggacctcaaggt
ggaatggtgggacaaatggttactccacaaaacaagtacggattgcaacaaaatcaacaa
gctcaatggaacctcactcagatgaatcagcaaatggccgggatgagtctcagtagttcc
agcaacgtgatgggctttggccagccccccagcacagtggcaggatggactggaagctcc
tctggtcagactctgagcacacaactgtggaaatga
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