KEGG   Oxyura jamaicensis (ruddy duck): 118163820
Entry
118163820         CDS       T11549                                 
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
  KO
K06115  spectrin beta, non-erythrocytic 1/4/5
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04517  IgSF CAM signaling
oja04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oja00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    118163820 (SPTBN1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118163820 (SPTBN1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oja04812]
    118163820 (SPTBN1)
Cytoskeleton proteins [BR:oja04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     118163820 (SPTBN1)
  Intermediate filaments
   Intermediate filament-binding proteins
    118163820 (SPTBN1)
SSDB
Motif
Pfam: Spectrin CH PH_9 PH CAMSAP_CH SCAR_helical SOS1_NGEF_PH
Other DBs
NCBI-GeneID: 118163820
NCBI-ProteinID: XP_035176729
LinkDB
Position
3:join(1595453..1595600,1633535..1633686,1638338..1638511,1639811..1639902,1641847..1641927,1642701..1642816,1643827..1643939,1644558..1644745,1645789..1645906,1647462..1647620,1648298..1648600,1649413..1649566,1650255..1651125,1651253..1651390,1652068..1652824,1653061..1653263,1659927..1660017,1664479..1664625,1666174..1666437,1667138..1667362,1667571..1667660,1667956..1668234,1669433..1669563,1670964..1671168,1671319..1671693,1673810..1674054,1674480..1674618,1675744..1675828,1676937..1677133,1678281..1678393,1679080..1679143,1684308..1684546,1685850..1686023,1687773..1687815,1688160..1688375)
AA seq 2362 aa
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
AIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
TPEPSPKVAEDADSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKAAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq 7089 nt   +upstreamnt  +downstreamnt
atgacgacaacagtagcgacagattacgacaatattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggatgttgatgactgggacaatgaaaacagttctgctcgcctgttt
gagcgatcccgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
acaaagtgggttaattcccacttggcacgcgtgtcatgcagaattacggatttgtacact
gaccttcgtgatggaaggatgctcatcaaacttctggaagttctttcaggagagcgactt
cccaaaccaactaagggaaggatgcgcatccattgcctggagaacgttgataaagccctc
cagttcctgaaagagcaacgagtacacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctgaggttccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgcgttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaattttacaaca
agctggagggacgggatggctttcaacgcactaatacataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcaaaatgcttttaacctt
gcagagcaacaccttggtcttactaagctcctggaccctgaggatatcagtgttgatcat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagcattagctgttgaaggaaagcgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgattgaaaaatacgaatcgctggcttctgaccttcttgagtggattgaacaa
accattatcatcctcaacaatcgcaaatttgccaactcgctagttggtgtgcagcagcag
ctacaggcgttcaacacttaccgcacagtagagaaaccacccaagtttacagaaaaagga
aacctagaagtgctactttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacctggctaagtgaa
aatcaacgtctagtttctcaggataattttggctttgaccttccagcggtggaggctgca
acaaagaagcatgaggccattgaaacagatattgcagcatatgaagaacgagtccaagct
gtggttgcagttgcaaaggagcttgagactgaaaattatcatgatataaaacgcatcact
gcaagaaaggacaatgttatacgcttgtgggaatacctcctggagctgctcagggcacgg
agacaacgtctggagatgaatcttggcctgcaaaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttctgctgtctcaagactatggcaaacatttg
ttaggagtcgaagacctgttgcagaaacatgctcttgtggaagctgacattgccattcag
gctgagagagtgagaggggtcaatgcatctgcacagaagtttgccaccgatggagaaggt
tacaaaccatgtgacccacaggttatcagggaccgcgttgctcacatggagttctgttac
caagagttgtgccagcttgcagccgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctttcatctgatgactatgggaaggacctaaccagtgttgtccgtctcttgagtaaacat
aaggcgtttgaagacgaaatgagtggtcgtagtggccacttccagcaagcgataaaagaa
ggtgaagacatgattgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacttggaacagttatctgccattaggaagaaacgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgacgcatggatg
ttggacatcctcaaaattgtctccagcaacgatgttggtcatgatgaatattctacacag
tccttggtcaagaaacacaaggatgttgctgaagagattgcaagctaccggccaaccatt
gactcacttcacgagcaggcaaaggctctaccacaggaacacgccgggtctccagatgtg
caaggcaggttgtccggaatagaagaaagatacaaggaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataagatgttcagcgaggcagatgca
tgtgaactttggatagatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaacctgaaatgaacaat
caggcttcccgtgttgcagtagtgaaccaaattgctaggcagctaatgcacagtggccat
ccaagtgagaaggagatcaaagcacagcaagataaactcaacacgagatggagccagttc
agagaactggtagacagaaagaaggatgctctactctcggccctgagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggaaaagacaaaagtgattgaatcc
acacaagatctgggtaatgatctcgctggagtgatggccctgcagaggaagctgacgggc
atggaacgtgacctggtagccattgaggctaagctcagtgacctgcaaaaagaggcagaa
aagttggaatcagagcatcctgaccaggcacaggctatcctttcacgacttgcagaaatc
aacgatgtatgggaagaaatgaagaccactctcaagaaccgggaagagtctcttggagag
gcaagcaaactgcaacagttcctgagagatctagatgacttccagtcatggttatccaga
actcagactgcaattgcctctgaagacatgccaaacacactgacagaggctgagaagctg
ctcactcaacatgagaatattaagaatgaaatcaacaattatgaagaagactatcagaaa
atgagggacatgggtgagatggtgacacaagggcaaaccgacgctcagtacatgttccta
cgccagcgcctacaagctttggacactggatggaatgagctccacaaaatgtgggagaac
aggcaaaatctcctctcccagtctcatgcctaccagctatttctcagagataccaaacaa
gcagaagcatttcttaataaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgactacaatggatgcc
aatgaagaaaagatcaatgcagtcgtagagactggcagaaggctagttagtgatgggaac
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagtgaacttctgatgagactgaaagataacagggatcttcaaaagttt
cttcaggattgtcaagagctctcactctggatcaatgaaaagatgcttacagcccaggat
atgtcctatgatgaggcaaggaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagctcgaatccactacccagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agtcaaattcagtcagacgactatggaaaggatctcaccagtgtcaacatcctgttgaag
aagcagcagatgctagagaatcaaatggatgttcgtaagaaggagatagaggaactgcaa
agccaggcacgggctttaagtcaggaagggaagagcacagatgaagtagatggaaaacgc
ctcactgtagaaaagaaatttttggagttgctggaacctttgaatgaaagaaaggcaaac
ctgctggcctccaaagaaatccaccagtttaaccgggatgtggaagatgaaattttgtgg
gttggagagagaatgcctatagcaacatctactgatcatggacacaacctccagactgtg
cagctactgataaagaaaaatcagacccttcagaaagaaatccaaggacatcagcctcgt
attgatgatatttttgagaggagtcaaaatattatcacagacagtagccctaatgccgaa
gccattcagcagagacttgcagacttgaagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaagcgcctagaggagtctcacagagcgcagcagtattactttgatgct
gctgaggccgaagcctggatgagtgagcaggagctctacatgatgtcagaagagaaagcc
aaggatgaacagagtgcagtatccatgttgaagaagcaccagattttggaacaggctgta
gaagactatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcaccctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctcgctgaagagagaagaggcaaactggatgaaagacacaggctcttc
cagcttaaccgagaggtggatgacctggagcagtggattgctgaaagggaggtggtggca
ggatcccatgagttgggacaggattatgagcatgtaacgatgctacaggagcgattccgg
gaatttgcccgagacactggaaacattggacaggagcgtgttgatactgttaaccacatg
gcagacgaactcatcaactctggacattcggatgctgcaacaattgcagagtggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacgagaacacaaattcta
gcagcctcttatgaactgcacaaattttaccacgatgccaaggaaatcttaggacgcatt
caagacaaacacaagaaactgccagaagagcttggtagagaccaaaacacagtggaaaca
ctacaaagaatgcacactacatttgaacatgatatccaggcactcggtacccaggtaaga
cagctgcaggaggatgctgcacgccttcaggctgcctatgctggggacaaagctgatgac
atccagaagagggaaaatgaggtcctagaagcctggaaggcactgttggatgcctgcgag
ggccgcagggttagactggtggacacaggagacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttatccggcaaatcgaagcccaggaaaagccaagg
gatgtttcgtctgttgaactgctaatgaacaatcaccagggtatcaaagcagaaatcgat
gcccgaaatgacagctttactacctgtattgagcttggcaaatctcttctggcaagaaaa
cactacgcatcagaggagatcaaggaaaagctactgcagctgacagagaaaagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcatcag
ttttcaagagatgcaagtgtggctgaggcctggctgctggggcaggagccctacctatcc
agtcgtgaaataggtcaaagtgttgatgaagtggaaaaattaatcaagcggcatgaagca
tttgagaaatccgcagctacttgggatgagagatttgcagcactggaaagactgaccacg
ttggaactgctggaagtacgtcgacaacaggaggaagaggagaggaagagacagccgcct
actccagaaccaagcccaaaggttgcagaggatgcagactcccagcagcaatgggatgga
acaaaaggagaacaggtttcccagaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcagaaacaaatgaaatggtcaatggagctgcagaacagaggacaagttca
aaagagtctagtcctgttccttctccaacggcagaccgcaaagccaaggctgccattcag
gcccagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggaa
ggcttcttacatcgtaaacatgaatgggagacacacagcaagaaagcctccagcagatca
tggcataacgtgtactgtgtcataaacaaccaagaaatgggcttctacaaggattcaaaa
gctgctgcttctggcattccctaccacaatgagattcctgtcagcttgaaagaagcagtc
tgtgaaatagcagtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcatctgataaaatcgaagtgtccccgaccactcagagcactcca
gcttccagccgtgcccagaccctgcctgccagtgtcacgataaccagcgagtccagtcct
ggcaagagggagaaagacaaagagaaagataaagagaaaagattcagcctttttggtaaa
aagaagtga

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