Oxyura jamaicensis (ruddy duck): 118164197
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Entry
118164197 CDS
T11549
Symbol
CLN8
Name
(RefSeq) protein CLN8 isoform X1
KO
K12360
ceroid-lipofuscinosis neuronal protein 8
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
118164197 (CLN8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oja04131
]
118164197 (CLN8)
Membrane trafficking [BR:
oja04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118164197 (CLN8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRAM_LAG1_CLN8
GT2_TM_C
Motif
Other DBs
NCBI-GeneID:
118164197
NCBI-ProteinID:
XP_035177473
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All DBs
Position
3:complement(join(97071076..97071390,97071815..97072357))
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AA seq
285 aa
AA seq
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MNPTDDDPVFGTIFDWDYLLWEVRLTFLAAGFLIYLGVFLLSHWLSSWISTTYRALHAKE
KVFWNMAVTRGVFGLQSCVSGLWALLIDPVFHADKVYSQQKWSWFNCLIAAGFFLLENVA
VHVSNIVFRTFDVFLVVHHLLAFGGLAGLVINVESGHYLPLMGMLLEMSTPSTCISWMLL
KAGCANTFFWKANQWVMIHLFHCRMILTYHMWWVLIFNWNSVIKNLGLLHFIVSFSGLFA
VTVILNPYWTYKKTQQLLSPTDWNFESKATENGKINGDTHQKKKI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccacagatgatgatccagtgtttgggaccatttttgactgggactacctctta
tgggaagttcgtttgacatttttagctgctggttttttaatctacctgggagtatttctt
ctgtcccactggttgtcttcctggataagtaccacttatcgtgcgttgcatgcaaaggag
aaggtgttttggaatatggcagtcacacgtggtgtatttggacttcagagctgtgtttct
ggcctatgggctttgctcatagatcccgtttttcatgcagacaaagtgtattcacagcaa
aagtggagctggtttaactgtttaatagctgctggatttttcttgcttgaaaatgtagct
gttcatgtgtccaacattgtttttagaacatttgatgtgttcttggtagttcatcaccta
cttgcttttggtggcttggctggtctagtaatcaatgtagaatctggacattatctacct
ttgatgggaatgttgctggagatgagcactccctcaacgtgcatttcctggatgcttcta
aaggctggctgtgcaaatacctttttctggaaggccaaccagtgggtgatgatccacctg
ttccactgccgcatgattcttacttaccacatgtggtgggtgcttattttcaactggaat
tctgtgataaaaaatctgggactccttcattttattgtttcattctctggattatttgct
gtcacagtaatacttaacccatactggacatacaaaaaaactcagcagctcctcagccca
actgactggaactttgaaagtaaagcgacagaaaatggaaaaataaatggtgacacacat
caaaagaagaagatataa
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