Oxyura jamaicensis (ruddy duck): 118165050
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Entry
118165050 CDS
T11549
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03013
Nucleocytoplasmic transport
oja03015
mRNA surveillance pathway
oja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118165050 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
118165050 (EIF4A3)
03015 mRNA surveillance pathway
118165050 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oja03019
]
118165050 (EIF4A3)
03041 Spliceosome [BR:
oja03041
]
118165050 (EIF4A3)
03009 Ribosome biogenesis [BR:
oja03009
]
118165050 (EIF4A3)
03012 Translation factors [BR:
oja03012
]
118165050 (EIF4A3)
Enzymes [BR:
oja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118165050 (EIF4A3)
Messenger RNA biogenesis [BR:
oja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118165050 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
118165050 (EIF4A3)
Spliceosome [BR:
oja03041
]
Complex C
Other components
EJC/TREX
118165050 (EIF4A3)
Ribosome biogenesis [BR:
oja03009
]
Eukaryotic type
90S particles
Helicases
118165050 (EIF4A3)
Translation factors [BR:
oja03012
]
Eukaryotic type
Initiation factors
eIF-4
118165050 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118165050
NCBI-ProteinID:
XP_035178818
LinkDB
All DBs
Position
3:14085933..14093510
Genome browser
AA seq
448 aa
AA seq
DB search
MRVPPSGSLNPASAHAHCAQRPGLSCEAAAAGEAAAMSGSAGSGGGSGSARKRLMKEEDM
TKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQ
SGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGG
TNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYD
VYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEW
KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEF
RSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKN
DDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcccccctctggctccctcaaccccgcctctgcgcatgcgcactgcgcgcag
cggcctggtctctcgtgtgaggcggcggcggcaggagaggccgcggccatgtcgggctcg
gcgggctccggcggcggcagcggctcggcgaggaagcggctgatgaaggaggaggacatg
accaaggtggagttcgagacgagcgaggaggtggacgtgacgcccaccttcgacaccatg
gggctgcgggaggacctgctgcggggcatctacgcctacgggtttgagaagccgtcggcc
atccagcagcgagccatcaagcagatcatcaagggccgggacgtgatcgcacagtcacag
tccggaacaggaaaaacagcaacgttctccatctccgttctgcagtgcttggatatacag
gttcgtgagacccaggccctgatcttagcaccaactcgggagctggctgtacagattcag
aagggtcttcttgctctgggagactacatgaacgtccagtgtcacgcctgcattggaggc
accaacgtgggggaagacattcgaaagctggattacgggcagcacgttgtggctggcact
ccaggccgggtgttcgatatgattcggcgtcgaagtttaaggactcgagccatcaaaatg
ctggttttggatgaagcagacgaaatgctcaataaaggttttaaggaacagatttatgat
gtgtacagatatttgcctccagctacgcaggtggttctgatcagtgccactttgcctcat
gaaattctggagatgaccaacaaattcatgaccgaccccattcgcatcttggtcaaacgt
gatgagttgacccttgaaggaatcaagcagtttttcgtggctgtggagagggaggaatgg
aagtttgacaccttgtgcgatctctacgacacgctcaccatcacccaggctgtcatcttc
tgtaacaccaagagaaaggtcgactggctcacggagaagatgagagaagccaacttcaca
gtttcatccatgcatggggacatgccgcagaaggagagagagtccatcatgaaagagttc
agatctggtgcaagccgagtccttatctcaacagatgtttgggctagaggcctggatgtg
cctcaggtgtccctgatcattaactacgacttgcccaacaacagagaactctacatacac
agaattggccgctcgggcagatacgggcgaaaaggtgtagctatcaactttgtgaagaac
gacgacatccgcatcctgcgggacatcgagcagtactactccacccagatcgacgagatg
cccatgaacgttgctgatcttatctga
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