Oxyura jamaicensis (ruddy duck): 118166168
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Entry
118166168 CDS
T11549
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja03013
Nucleocytoplasmic transport
oja03015
mRNA surveillance pathway
oja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118166168
09122 Translation
03013 Nucleocytoplasmic transport
118166168
03015 mRNA surveillance pathway
118166168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oja03019
]
118166168
03041 Spliceosome [BR:
oja03041
]
118166168
Messenger RNA biogenesis [BR:
oja03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118166168
Spliceosome [BR:
oja03041
]
Common components
Common spliceosomal components
Cap binding complex
118166168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118166168
NCBI-ProteinID:
XP_035180736
LinkDB
All DBs
Position
4:join(9715628..9715714,9715828..9716009,9716718..9716856,9717366..9717464)
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AA seq
168 aa
AA seq
DB search
MSGLLHTTLSGLNSDSYCEISRYRDQHFRGSKKLQEKFLKISSTLYVGNLSFYTTEEQIQ
ELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIVRTDWDA
GFKEGRQYGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKANHQPAVY
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggctgctgcacaccacgctcagcggcctcaacagcgactcctactgcgagatc
agccgctatcgcgaccagcacttccggggtagcaagaagctgcaggagaagttcctgaag
atctcctccacgctgtacgtgggcaacctgtcgttctacaccaccgaggagcagatccag
gagctcttctccaagtgcggcgacgtcaagcgcatcgtcatggggctggacaagatcaag
aagacgccctgcggcttctgcttcgtcgaatactacacgagagcagacgctgaacacgcc
atgcgatttatcaacggcacacgactagacgaccgcatcgttcgaacagactgggatgca
gggtttaaggagggccggcagtatggaagaggaaagactggaggacaggtgcgagatgaa
taccggacagactacgatgtgggaagaggtggctttggcaagattattcagatgcagaag
gcaaatcatcagcctgcagtctattaa
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