Oxyura jamaicensis (ruddy duck): 118166546
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Entry
118166546 CDS
T11549
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
oja Oxyura jamaicensis (ruddy duck)
Pathway
oja04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118166546 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118166546 (ATRX)
03036 Chromosome and associated proteins [BR:
oja03036
]
118166546 (ATRX)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118166546 (ATRX)
Chromosome and associated proteins [BR:
oja03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118166546 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
118166546
NCBI-ProteinID:
XP_035181414
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Position
4:complement(16858358..16943762)
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AA seq
2444 aa
AA seq
DB search
MLVVASPFSVPLLQCSGISWLCLIHESKLNTLVQKLHDFLAHSSEESEDANSPPALSKNK
TIGKSREPESSPTSMENNREEGSSSSERMKSLGSSRSKRKPTIVTKYVGSDDEQILDETV
NEDNSNENSENDVDMKSLPKGTVVVQPEPVLNEDKDDFKGPEFRSRNTVKMKPEAPKKRG
EEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQCR
WCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENDQWHCYICHPEPLLDLVAACD
SVFENLEQLLQQNKKKIKVESEKSKIYDHTVKFSPKRNNSNCNGEEKKLDDSYSGSLTYS
YKALMVPKDMLKKTKKLVETTANMNSSFVSFLKKAAENLEISPAVQLRQLKAFKSVLGDI
KKCHLALEEGLNLEIQALDIKIKEKNTKEKKTDIRSEKNEVKKDEGKEHAALKEDDTVKK
QKKVVSEQPDNEPMDQSVPTMEQTDNKRATGEEKKSGTNEEPQYEPNSTEALDMDIVSVP
SSVPEDIFETLESAMEIQTTADEQGSGNAGTDHETLNSNMKSNTPLKDTKSGTKLKASAK
GTKELIVKLTPVSLSESPVKDEDSSLEKGSKDVDAVPTAEKCDSVKQNHNAGSERSTENE
TVSLAEESDLRRSPRVKTTPLRRQTDMNPLTSNSEEDSNDTCNEKRKRKSSKQPRRKKDK
RNSSDSTVDGPSPNKLSKSKKADILDSSDSDEMPAVLKEVAMMSRSSSDIDSNSEALAND
QKPLSVLKKEPAKDENGKRKRKSSSSGSDLDAKRGKSAKNSAAAKKKRQNYSDSSNYDSE
LEKEIKSLSKIESAKKAKKKYSRKDDSYDSSEEEQKKKVSKRKTNLKKQRGKSSEDDAAD
KSTPEKEINHSSEDKKIRVGSDVKEGVSTDLEEKAVKGKQDESSDVEKSLLEKEESSPKG
VKLSEVKKNKDLKKKKAQEDSSSESAEKHAKKEQNSDSPKEKFKNKKRLERKEKKSENLK
KKSFKKEHDDSSSDVEKSSPEKGSCNSSENDKTKNEKTAKEKKRMNLRERVSKRVQIDLS
SDAEKSPLKEESSSEDAVRNKKQRETKEKKKISHKKKITKKEQNDSSSSDEESYENNKKK
IKRGSVKESKKNNLKEKKKMSKKVVVTSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENL
MLSAGTGFCQSSGDEGDPKSRAVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDAS
SDEESDEGKKKTGKQNENTADDEENEKEEDNSESDSEEEDSKKPRYRHRLLRHKLTVSDG
ESGEEKKGKPKDTKEGKRRNRRKVSSDDSNESEFHESAVSEEVSESEDDQRPRTRSAKKA
EAEENQRSYKQKKKRRRIKVQEDSSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDK
LRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEP
LVQVHRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFL
HTVLLCDKLDFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYM
LQRWQDDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEA
SAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQ
CADSTLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQ
YYLDHLTGVGSGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSLD
DFIASDSDETSMSLSSDDYAKKKKSKGKKMKKECSSSGSGSDNDVEVIKVWNSRSRGGGE
GNAEELVNNPPSVTKSDEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEIL
RMAEELGDKVLVFSQSLISLDLIEDFLELANREKTDKDKASIYKGEGKWFRNIDYYRLDG
STTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSI
FRVYRFGQNKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELY
TFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTE
EERKAAWAEYEAEKKGLTMRFNMPTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLI
NQGREKVVEATNNVTAARIQPLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRRE
AIYNDVLTKQQMLIGCVQRILMNRRLQHQYNQQQQQQMSYQQAAMSHLMMPKPPNLIMNP
SNYQQIDMRGMYQSVSGGMQPPPLQRAPPPMRGKNPGPSPGKSM
NT seq
7335 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtcgcatctcctttcagtgttcctctcctgcagtgttcaggcatctcctgg
ctgtgtttgatccatgaaagcaagttgaatacattggtgcagaaactccatgacttcttg
gctcactcatcggaagaatctgaggacgcaaattctcctccagcattatctaaaaacaaa
accataggtaaaagtagagaacctgagagtagtccaacatcaatggagaacaacagagaa
gagggcagcagctcttcagaaagaatgaaatccttaggatcatcacgttcaaaaaggaaa
cctacaattgtaacaaaatatgtcggatcagatgatgaacaaatcttagatgagactgta
aatgaagataattcaaatgaaaactcagaaaatgacgttgatatgaaaagcttgcctaaa
ggtacagtggttgtacagcctgagccagtgctgaatgaagacaaagatgattttaaaggg
cctgaatttagaagcagaaataccgttaaaatgaaacctgaagctcccaaaaagcgtgga
gaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaaccatttt
caaaaggattcaatctatagacatcctacactgaaagttcttatttgtaagacttgctac
aagtattacatgagcgatgacataagccgtgattcagatggaatggatgaacagtgtagg
tggtgtgctgaaggtggaaacttgatttgctgtgacttctgccataacgccttctgtaaa
aagtgcattttgcgcaacctgggtcgaaaggagctatcaactatactggatgaaaatgat
cagtggcactgctatatttgccatccagagcctctattggacttggtcgctgcttgtgac
agtgtctttgaaaacttggaacagttactgcagcaaaacaaaaaaaagatcaaagtggaa
agtgaaaaaagtaaaatatacgaccacacagtgaaattttctccaaagagaaataattca
aattgcaatggtgaagaaaaaaaactagatgattcatattcaggttcactgacatactct
tacaaagcactaatggtgccaaaagacatgcttaaaaaaacaaaaaaactggttgagact
acagcaaatatgaattctagctttgtaagctttttgaaaaaggctgcagaaaatttagaa
ataagcccagctgtgcagcttcgtcagctaaaagcttttaaatctgtgctgggtgacatc
aaaaaatgtcacctggcactagaagaaggtctgaacctggagattcaagctttggatatt
aaaatcaaagagaaaaataccaaagagaaaaaaactgacattagatcagaaaaaaatgag
gtgaagaaagatgaaggaaaggaacatgcggcattaaaagaggatgacactgtaaagaag
cagaaaaaagttgtatcggaacagcctgacaatgagccaatggatcaaagcgttccaaca
atggaacaaacagataacaaacgtgcaactggcgaagagaaaaagtctggcacaaatgaa
gaacctcagtatgaacctaatagtacggaggctttagacatggatatagtgtctgttccc
tcatctgttcctgaagatatttttgagactctagaatctgctatggaaattcagactaca
gcggatgagcaaggcagtggaaatgcaggaacagatcacgagactctaaattcaaatatg
aaatcaaacactcctttgaaagataccaaaagtggaactaagttaaaagcttcagctaag
ggaacaaaggaactgattgtaaaactgactcctgtttccctttcggagtctccagttaaa
gatgaagacagcagtctcgagaagggaagtaaggatgttgatgcagtacctacagcagaa
aaatgtgactctgtaaaacaaaatcataacgctggcagtgaacgttccacagagaatgaa
accgtctcacttgcggaggaatctgatctcaggagatcaccccgtgtgaagaccacacct
ctgaggcgccaaacagacatgaatcctttaacgtcaaattcggaagaagatagcaatgac
acgtgtaatgaaaaacgtaagagaaaatcatcaaaacagccaaggaggaaaaaagataaa
agaaactcttccgacagtactgttgatggtcctagtcctaataagctttctaaatcaaaa
aaggcagatatattagatagctcagattctgacgagatgccagctgttcttaaagaagta
gctatgatgagtcgcagttcttcagatattgatagcaatagcgaagcactagcaaatgat
cagaagcctttaagtgttctgaagaaagaaccggcaaaggatgaaaatggaaaacgaaaa
agaaaaagttccagttctggatcagatttagatgctaaaaggggcaaatctgccaaaaat
tctgctgctgcaaaaaagaaacgacagaactattcagattcttcaaactatgattctgag
ttagaaaaggagataaaaagcttgagtaaaattgagtctgcaaaaaaagctaagaaaaaa
tactccagaaaagacgacagttatgattcctcagaggaagagcagaagaagaaagttagc
aagaggaagacaaatctgaagaaacagagaggtaaatcttctgaagatgatgctgctgac
aagtcaaccccagagaaggagattaatcattcttctgaagataaaaaaataagagtgggg
tcggatgttaaggaaggggtaagcacagacttggaagaaaaagctgtaaagggaaagcaa
gacgagtcttctgatgttgagaagtctttactggagaaagaggagagctctcctaaaggt
gtaaagttaagtgaagttaagaaaaataaggatttgaagaaaaaaaaggcacaggaagat
tcctcttcagagagtgctgagaagcatgcaaagaaagaacagaattcggattctccaaaa
gagaaattcaagaacaaaaaaaggttagaaagaaaagagaagaaatctgaaaatttgaaa
aagaaaagcttcaagaaagaacatgatgattcctcttctgatgtcgaaaagtcgtcccca
gagaaaggaagttgcaattcttctgaaaatgacaaaactaaaaatgaaaaaacagcaaaa
gaaaagaaaaggatgaatttaagagagagagtgtctaaaagagtacagatcgatctgtct
tccgatgctgagaaatctcccctgaaagaggagagttcttctgaagatgctgtgcggaat
aaaaaacaacgtgaaactaaagaaaagaaaaaaataagtcacaaaaagaaaatcaccaag
aaagaacagaatgactcatcctcttctgatgaggagtcttacgaaaacaataagaaaaag
attaaaagagggtcagtgaaagaaagtaaaaagaataacttaaaagagaaaaagaaaatg
tcaaaaaaggttgttgtcacttcttcatcctcatctgataaggaagaaaatgatgagcag
aattcaacaggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaattta
atgctgtctgctggcacaggattttgtcagtcatcaggagatgagggagaccctaaatca
agggctgttccaatggaggaggaggaagatgatgatgatgacgatcctgagaatagaatt
gccaagaaaatgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatct
tcagatgaagagtcggatgaaggaaaaaagaaaactggaaaacaaaatgaaaacacagca
gatgatgaagagaatgaaaaggaggaggataattccgaatcagattcagaggaagaagac
tcaaagaagcccagatacagacacaggctgctgaggcacaagctgacagtgagtgatgga
gaatctggtgaagaaaaaaaggggaaacctaaagacacaaaagaaggaaagcgcagaaat
agaaggaaagtgagcagcgatgattcaaatgaatcggagtttcatgaatctgctgttagt
gaagaagtcagcgagtctgaagatgaccagcgtccaagaacaagatctgccaagaaagct
gaggcagaagaaaatcagcgcagttacaaacagaaaaagaaacggaggcgtataaaggtt
caagaggattcttcaagtgaaaacaacaacaagagtaattctgaggatgaagaaaacgac
gattcaaaatctcctggaaaaggcaggaagaaaataaggaagattattaaagatgataag
cttagaacagaaacacaaaatgcacttaaagaggaagaagaaagaagaaaacggatagca
gaaagagaacgggagagagagaagttgagagaggtgatagagatagaagatgcttcacct
ctgaaatgtcccattacaacaaagctggttttagatgaagatgaagaaacaaaagaacca
ttagtgcaggttcacaggagtatagttaccagactgaaaccacaccaagtagatggtgtt
cagttcatgtgggattgctgttgtgaatctgttaaaaagacaaagacgtctcctggttca
ggatgcattcttgctcactgtatgggtctggggaaaacgttacaggtcgtaagttttctt
cacacggtcttgctttgtgacaagctggatttccggacggctctggtagtgtgtccgctg
aacactgccttgaactggttgaatgagtttgaaaaatggcaagaaggtttagaagacgat
gagaaattagaggtctgtgaactagcaactgtgaaacgcccccaggagagaagctatatg
ctccagcgttggcaagatgacggaggtgtgatgatcataggctacgagatgtatcgtaat
cttgcacaaggcaggaatgtgaagagtagaaaacttaaagaaatatttaataaagcttta
gttgatccaggccctgactttgttgtttgtgacgaagggcacatactaaaaaatgaagca
tctgctgtttctaaggcaatgaattctattcgatccaggaggagaataatccttacagga
acaccactgcaaaataatcttatagaatatcactgcatggttaactttattaaggagaat
ttgcttggttccattaaagaattccgaaatcgattcataaatccaattcagaacggtcag
tgtgcagactccactctggtagatgtcagagtaatgaagaagcgtgcacatattctctat
gagatgttagctggatgcgttcagaggaaagattacacagcgttaacaaagttcctccca
ccaaaatatgagtatgttctagaagttagaatgacacctattcagtgcaaactctaccaa
tactacttggatcatttgacaggtgtaggtagtggcaacgaaggtggacgaggcaaagct
ggagctaaactattccaggatttccagatgttgagcagaatctggactcacccctggtgt
ttgcagctggactatattagcaaagaaaataagggctattttgatgaagacagtctggat
gacttcatagcttcagattctgatgaaacttcaatgagtttaagctctgatgattatgca
aagaaaaaaaaatccaaggggaaaaaaatgaagaaagagtgtagctcaagtgggagtggc
agtgataatgatgtagaagtcataaaagtgtggaattcaagatctcgtggaggtggagaa
ggaaatgcagaagaacttgtaaacaatcctccgtctgttacaaaatcagatgaaggtaaa
gctacgtcgtcttcaaatcctggtagcccagctccggactggtacaaagatttcgtcact
gatgcagatgctgaagtgttggaacattctgggaaaatggtgcttctcttcgaaatcctt
cgaatggcagaggagcttggggacaaagtcctagtatttagccaatccctaatatcactg
gatttgatagaagattttctggagctggccaacagggagaaaactgacaaagataaggct
tctatttataaaggtgaaggaaaatggttcagaaacattgattactatcgcttagacggc
tcaactacagctcagtcaagaaagaagtgggctgaagaatttaatgatgaaactaatgtg
agaggccgcttgtttattatctccactaaagcaggctcccttggaattaatcttgtggct
gctaatagagtaatcatctttgatgcttcttggaacccatcgtatgatatccagagtatt
ttcagggtttaccgctttgggcagaacaaacctgtgtttgtgtacaggtttttggctcag
ggaacgatggaagataagatctatgatcgtcaggtaacaaagcagtcgctgtctttccgg
gttgttgaccaacagcaagttgaacgtcacttcacgatgaacgagctcacagagctgtat
acctttgagccagacttgctggatgaccctaattcagaaaagaaaaagaagagagataca
ccgatgctgcctaaagatacaattctggcagagttgcttcagatcaataaagagtacata
gtcggatatcatgaacatgattctctcctggaccataaggaggaagaggagctcactgaa
gaagaaaggaaggcagcatgggcagaatatgaagcagaaaagaagggcttgaccatgcgt
ttcaacatgccgaccgggaccaacatgcttcccacaaatttcaactctcagaccccgtat
attcctttcaatctgggtgctctgtcagcaatgagcaaccagcagctggaggacctcatt
aatcaaggaagagagaaagttgtggaagcaaccaacaatgtaactgcagcaagaattcag
ccccttgaagacatcatttcaacaatatggaaagagaatgtaacactcacagagagccaa
gtacaggccctggccctgagcaggcaggcaagccaggagcttgatgttaagcgccgagaa
gccatctataacgacgtccttactaaacaacagatgttaatcggttgtgttcagaggata
cttatgaacagaagactacagcatcagtacaatcagcagcaacagcagcagatgtcttac
cagcaagcagcaatgagtcatctcatgatgccaaagcctccaaatttaatcatgaatcct
tccaactaccaacagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcaa
ccaccacctttacaacgagcaccaccccccatgagaggcaaaaatccagggccttcccca
gggaaatcaatgtga
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integrated database retrieval system
