KEGG T11549: 118166605

Oxyura jamaicensis (ruddy duck): 118166605

Entry

118166605         CDS       T11549

Symbol

UVSSA

Name

(RefSeq) UV-stimulated scaffold protein A

K23720

UV-stimulated scaffold protein A

Organism

oja Oxyura jamaicensis (ruddy duck)

Pathway

oja03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:oja00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    118166605 (UVSSA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oja03400]
    118166605 (UVSSA)
DNA repair and recombination proteins [BR:oja03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      118166605 (UVSSA)

SSDB

Motif

Pfam:

UVSSA_N DUF2043

Other DBs

NCBI-GeneID:

118166605

NCBI-ProteinID:

XP_035181539

LinkDB

Position

4:complement(join(89197282..89197375,89201550..89201733,89206642..89206753,89207606..89207789,89210748..89210900,89212172..89212349,89225423..89225531,89240278..89240400,89241007..89241116,89242219..89242650,89243749..89243869,89247981..89248311,89248413..89248510))

AA seq 742 aa
MAQRLAELVEELTTAGEPQLEPGRLKELKKICKSSDDHIGHAYHLLLTRLREPHAQVRLS
AFQAVQELFARSHRFRTLLIADFQEFLELAVGTELRQPLPPPAEVAQKLRKAAVECVQDW
HDKYGEAYKKLALGYHYLRQNKKVDFQDVRARTMAERQREEEKQKRLDNIYKEKAKRAEK
EMAEMSQEIAETLTEMENCFRLLMPDPFEFTVNDTTLEPYEEKTANDSPAPPLSSQTEVT
QSYVGCLDDEQPCCSKDILFASQGVRTEKNAELDDKQETPEQKELDGGTSLEVESGVGAL
HDDDYETFVRNHGLISHKYTLDLEISTDLKVHENEDNTAVINNVVDAHKLLRNKFLPSVQ
SWIQLFTRAGINDDRLRCAIDLKNKLETAMNKYKEMNICFKERNVMKASDDDDDDDEDEF
VEVPEKEGYEPHIPDHLRKEYGLEPQSPPKAPAMKTAAGPAPVSSRARLKGNEDELDPTC
AAATLKLIRDKLPKLTPPCASESASTEPAASEEPDSKRRKLEEERAKAPLMPFGLDLHYW
GQDQPSAGKILKFSSEHRFWAPSEVEEEVENNEIAEMLKTRYITFAGKFEPVKHKCRAPM
PDGSLCERQDRIKCPFHGKIIPRDELGVPVNAEDRAREEKMRFEKQAAQPEWRDPEFMRE
VEAATGVDLGSSKNEGKGGKKKGKRKKYPNLTDLKQQANTSRSRLEKKVFNKGAVKRVVK
AMNQMDQRKHEKFANQFNYALN

NT seq 2229 nt +upstreamnt +downstreamnt
atggcgcagcggctggccgaactggtggaggagctcaccacggccggggagccgcagctg
gagccgggcaggctgaaggagctgaagaaaatctgcaagtcctcggacgatcacatcggc
catgcctaccacctgctgctgacgaggctgagggagccgcacgcccaggtgcgcctgtca
gccttccaggccgtccaggagctctttgccaggtcccaccggttccgcacgctgctcatc
gctgacttccaggagttcttggagctggcggtgggcaccgagctccggcagcccctcccg
ccgcccgccgaggtggcgcagaagctgaggaaggccgctgttgagtgcgtgcaggactgg
cacgacaagtacggggaggcctacaagaagctggcgctggggtaccactatctgaggcag
aataagaaggtggattttcaagatgtgcgtgccagaaccatggctgaaaggcagagggaa
gaggagaagcagaaacgattggataacatttacaaagaaaaagccaaaagagctgaaaaa
gaaatggcagaaatgtcccaggagattgctgaaacactgacagagatggagaactgtttc
cggcttctgatgcctgatccttttgagttcactgtgaatgacacaactctggaaccctac
gaagaaaagactgctaatgatagtcctgcacctcccttgtcctcccagacagaagttacc
cagtcatatgttggatgcctggatgatgaacagccgtgctgcagcaaggacatccttttt
gcttctcagggcgttagaactgagaaaaatgcagagttagatgacaaacaggagacacct
gagcaaaaagaattagatggaggcacatccttggaagttgaatctggtgtcggtgctctc
catgatgatgattacgaaacttttgttaggaaccatgggcttatttctcataagtatact
ctagaccttgaaatctccacagatttaaaagtgcacgagaatgaagacaatactgctgta
ataaacaatgttgtggatgctcacaaactcctcagaaataagttcttgccttccgtgcag
tcctggattcagttatttaccagagcaggaataaatgatgatcggctgagatgtgccatt
gatctgaaaaataaactggagactgctatgaataaatacaaggagatgaacatctgcttt
aaagagagaaacgtgatgaaagcctcagatgatgatgacgatgatgacgaagatgaattt
gtggaggtccctgagaaggaaggttatgagccccacattccagaccacctgcgtaaggaa
tatgggctagagcctcagtcacccccaaaagccccagcgatgaagacagcagcaggacca
gctccagtcagctcccgagcccggctgaaaggaaatgaagatgaacttgacccaacgtgt
gctgctgcaacgctgaaactcatcagagacaaactaccaaagttaacgcctccatgtgcc
agcgagtctgcatctactgagccagcagcttcggaagagcctgacagtaagagaagaaaa
ctagaagaggaaagagcaaaagctcccctcatgccttttgggttagatcttcactactgg
ggacaggatcagccaagcgctgggaagattctcaaattttcttctgagcatcgattttgg
gcacccagcgaagtagaggaagaggtggaaaataatgaaatagctgaaatgttaaaaact
agatatataacatttgctggcaagtttgaaccagtgaagcataaatgtcgagcaccaatg
cctgatggaagtctgtgcgaaagacaagatcggattaagtgccctttccatggaaagata
attcctcgggatgagcttggggttcctgtcaatgcagaggacagagccagagaagaaaag
atgcggtttgagaagcaagcagctcagccagagtggcgagatccagaattcatgagagaa
gttgaagcagctacaggagtagatctcggttcctctaaaaatgaagggaaaggagggaaa
aagaaagggaagaggaagaaatacccaaatctgacagacctgaagcagcaggccaacact
tctcgttcacggcttgagaagaaagtcttcaataaaggtgctgtgaaacgggtggtgaaa
gcaatgaatcagatggaccaaaggaagcatgagaagtttgccaaccagtttaactatgca
ctgaattaa

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