KEGG   Oxyura jamaicensis (ruddy duck): 118166944
Entry
118166944         CDS       T11549                                 
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118166944 (NUP58)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118166944 (NUP58)
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118166944 (NUP58)
SSDB
Motif
Pfam: Nucleoporin_FG2 NUP58_M FapA NET2A_C Tox-ODYAM1 Mitofilin Nup49_C XAC0095_dom TBCA
Other DBs
NCBI-GeneID: 118166944
NCBI-ProteinID: XP_035181998
LinkDB
Position
1:complement(join(184443849..184444018,184448512..184448607,184451296..184451394,184457677..184457878,184460715..184460797,184463296..184463414,184463687..184463766,184465084..184465258,184465975..184466040,184466490..184466514,184469306..184469416,184471034..184471168,184472178..184472330,184472996..184473034,184474342..184474481,184478354..184478472))
AA seq 603 aa
MSAGFSFGAGTLGSATAAAAGAGGGGGGGGGFSFGAATPSSTGGLNFGTLGSSTATATTS
APSVGFGSGLFGSKPTTGFTLGGTSTAGTATTIATALTLGTPATTSAATTGFSLGFNKPA
GSATPFALSITSTAAGGLSLSSALTSTPAAGTTGFTLNLGGTTAPTTTASTGLSLGGALA
GLGGSLFQNTSTAATGLGQNALSLTLGTTAAPSSTANEGLGGVEFSSSSDKKSDKTGTRA
EDSKALKDENLPPVICQDVENLQKFVKEQKQVQEETSRMSSKAMLKVQEDIKALKQLLSV
VASGLQRNTLNIDKLKMETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQ
LQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQ
YLGYRKTFLGDAMDVFEARRAEAKKWQSAPHVTTGPTPFSNIPNAAAVAMAATLTQQQQP
ATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSK
PSGSLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKR
GKR
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgtccgcgggcttctccttcggcgccggcaccctcggctccgcaacggccgctgcagcc
ggggcgggaggaggtggaggaggcggcggggggttttccttcggagccgccacgccgagc
tcaacaggtggacttaattttggaactctgggttcttccactgctacagcaactacgtca
gctccatcagtgggcttcgggagtggactttttggatcaaagccaaccactggctttacg
ctaggaggcaccagtacagcaggaacagcaacaaccattgctacagcactgacactaggc
acacctgctaccacatcagcagctaccacaggctttagtttaggtttcaacaaacctgca
ggttcagccacaccgtttgctttatctattacttctactgcagcaggtggcctatcgctg
tcgtctgctctaacatcgactcctgcagcaggtactactggctttaccttaaatttgggt
ggtacaactgctccgactacaactgcttccacaggcctctccttaggaggagccctagca
ggtttaggagggtcactcttccagaatacaagcacagcagcaacagggcttgggcagaat
gccttgagcttgactctggggacaacagcggctccttcaagtactgctaatgaaggtctt
ggtggtgttgagtttagtagctcttcagacaaaaaaagtgacaaaacaggaacaagagca
gaagatagcaaagcactaaaggatgaaaatctacctccagtaatctgtcaagatgtagaa
aacctacagaaatttgtgaaagaacaaaaacaagttcaggaagaaactagtagaatgtca
tctaaagcaatgcttaaagtacaggaagacattaaagctttgaaacaacttctctctgta
gttgccagtggattacagagaaacactcttaatattgacaagctgaaaatggaaactgca
caggagctgaagaatgcagaaatagcattaagaacgcagaaaactcctcctggtctccag
catgaaaatacagccccagcagactacttcagaatcttggtagagcagtttgaagtacaa
ctgcagcaatacaggcaacaaatagaagaactggaaaatcatctagctactcaagcaaac
aattcacacataactccacaagatttgtccatggctatgcagaaaatctatcaaacattt
gtagctttagcagcccaacttcagtcaatacatgaaaatgtaaagatgctcaaagaccaa
taccttggctacaggaaaacctttctgggagatgccatggatgtgtttgaggcaagacga
gcagaagctaagaagtggcagagcgcgccacatgttaccactggaccgacccctttcagc
aacataccaaatgcagcagccgttgcgatggctgcaacacttactcagcagcaacagcct
gctacagggccacagccatctctgggagttagttttggaacgccattcggctcaggtatt
ggcactggcttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagc
tctgcctttggaagtagtgccacaggagcatcatcatttgggtttggaactacaagtaaa
ccatcaggaagtctaagtgcaggctttggcagctcgactacatctgggtttaacttcagc
aatcctggcatcacagcatctgctggtctgacgttcggggtgtctaatcctgcatctgca
ggctttgggacaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcga
gggaaaagatag

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