KEGG   Oxyura jamaicensis (ruddy duck): 118166993
Entry
118166993         CDS       T11549                                 
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
  KO
K05769  Rho guanine nucleotide exchange factor 4/29
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:oja00001]
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118166993 (SPATA13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oja04131]
    118166993 (SPATA13)
Membrane trafficking [BR:oja04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    118166993 (SPATA13)
SSDB
Motif
Pfam: RhoGEF SOS1_NGEF_PH PH SH3_1 SH3_9 SH3_2 RHG20_PH PH_5
Other DBs
NCBI-GeneID: 118166993
NCBI-ProteinID: XP_035182064
LinkDB
Position
1:join(184701315..184701536,184713667..184715454,184727724..184728086,184730416..184730560,184740810..184740946,184741378..184741557,184742598..184742783,184745555..184745734,184746468..184746700,184750088..184750217,184750931..184751303,184755830..184755904,184757154..184757335)
AA seq 1397 aa
MESFVRHEFRLIALVVRSGGSFAGINPAFSSPFGRCPPKRRCKPLTIPHISAFSLLLTVL
DYSTSMKLSQAFGKAVQPEELTSPGERGSKRSQGAADEGQAARPAAGDSSVALSCPSLHL
HAYSIEGMTTFQNGGTTVTCIVMDNKEPPNLTTSVSRNGGYSTGTGLEEEIQDEKLSPSK
IMRFFSTPRKRANSSSDRPRSLILMGNSSTWNALSSIRKMGSFKKLKSSVLQGIQARENS
DIVNENSVGKNISNGAVVRVQTNRYSYSGPLQDLQSTVDGLASDCSDAEESDESFLRNTH
RSRSIRRAYGAGRINLLDAEKTQSHHNGTRTTSPVLAEPKICEILVKDSENNRIVYRRSK
SSDNLNFLKKSSFKRKSTSNLTDLKAANEKQMPARAASATSADSDKTSVNPERRSKRWKS
PIRAKDFDRVLKLVSNVADVAWKKDGSKSAAPSPSEQSQRTRSNSRLHDDYSRRVSSSTD
HDRKRCTSSISSPDSSSPGTPCLQSPAAAQDKEAEMNVAGAEDKNLRTSSGFPESDSLSP
TLSDIGPFPNEVFDTDSDEPKAAQQFTWEAENPHVPVRPTAPKPQSPTVEKVKCNMDFQC
PDHHSTLSLSSMESEERGEVAGLKLGRNPVCFQDAVQTVYYDDGNEDSGISSHSQLSLNL
APGAEEKKEEVVSDDHWKKSSSQDEEKTDTQKVTPRRWSSGKRSRPRPLSDYGQMSIRSI
SIPEDAVAVESQKTDCTDGENQPRLASVGSAIQSNTVGYHRGRKRRPISVIGGVNFYGSG
PAEEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNA
AADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVHAEALWD
HVTMDDQELGFKAGDVIRVLEASNKDWWWGRIEDKEAWFPASFVRLRVNQEELPENCSSI
QDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMF
TTAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNN
HPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYT
TQEHSDYNDIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELI
HSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMELVDTEDGRD
KDFNINVKNAFKIINRATEEIHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISENQ
KKQAMQNARKSRHGKMKGVSYNGCPMPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKR
KPSLFWHTFNKLTPFKK
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggagagttttgtgcgccatgagttcaggttgattgcactggtggtgagatcaggggga
agctttgctggcattaaccctgctttttcaagcccttttggcagatgcccacccaaacgc
agatgtaagccattgaccattccccatatcagtgcattttcactgctcttaactgtgttg
gactacagcacttctatgaagttaagtcaggcatttggaaaggcagtgcagcctgaggag
ctcacctcgcccggcgaacgtggaagcaagaggagccaaggtgcagcagatgaaggacag
gcagcgaggccagctgctggagacagcagcgtggctttgagctgccccagcctccacctc
catgcgtacagcatcgagggcatgaccacatttcagaatggcggcaccaccgtcacctgt
atagtgatggataacaaggagcccccaaacctgacgacctctgtcagtcgtaatgggggg
tacagcaccggcacgggtctcgaagaggaaatacaagacgagaaactcagcccttccaaa
atcatgcgctttttctccacccctcggaaacgggcgaattccagctccgacaggcctcgg
tctctgattttgatgggcaactcttccacgtggaatgctctgtcttccatcaggaaaatg
gggtctttcaagaagctgaaatcgtccgttctccaagggattcaagcaagggaaaactca
gatatcgtaaacgagaacagtgtaggcaagaacatttcaaatggggcagtggtgagagtt
cagactaacaggtactcctattcgggacctttacaggatctgcagagcacagtggacggt
ttggcttctgactgctctgacgcggaggagagcgacgagtctttcctgaggaacactcac
cgctcacgcagcatcaggcgggcttacggcgccggccgcataaacttgctcgacgcagag
aagacccagagccatcacaacggcacgaggacaacgtctcccgtcctcgcggagccaaag
atctgtgagattttagtgaaagactctgaaaacaacaggatcgtttatcgaagaagcaaa
agttcggataatttaaactttctgaagaaaagctcgttcaaacggaagtcgacctcaaac
ctgaccgacctcaaggctgcaaatgaaaaacaaatgccagcaagggctgcgagcgctact
tctgctgactcggacaaaaccagcgtgaaccccgagaggagatccaagcgatggaagagc
cccatcagggcaaaggattttgaccgagttttgaagcttgtcagcaacgttgcagatgtc
gcgtggaagaaggatggctctaaaagcgcagctccttctcccagcgagcagtcccagaga
acgaggtcgaacagcagactgcacgatgactactcccgcagggtttccagtagcactgat
catgacagaaagagatgcacctcctcgatatctagtccagactcttcctcaccaggaaca
ccttgcctgcagagccccgcagctgctcaggataaagaggctgaaatgaatgtagctggt
gctgaagacaaaaacctcaggacgtcttcaggtttcccagaatctgatagcttgtcaccg
actctgagtgacatcgggccgtttcccaatgaagtgtttgatacagactcggatgaaccg
aaagctgcccagcagtttacatgggaagctgaaaatcctcacgttcctgtcaggccaact
gctccaaagcctcagagccccactgtggagaaggtcaagtgcaatatggattttcagtgc
ccagaccatcacagcacgctgtcactgagctcaatggaaagcgaggagaggggcgaggtc
gccgggctgaagctgggcaggaatcctgtctgcttccaggatgccgtgcaaaccgtgtac
tacgatgatggaaacgaggacagtggcataagcagccactctcagctgagcctcaattta
gcccctggtgcagaagaaaaaaaggaagaggttgtttctgatgaccactggaagaagtcc
tcatcccaggatgaagaaaagacagacacacagaaggtcacacccaggagatggagctct
ggaaaaaggtctcggcccagacctctctcagactatggccaaatgtcaatcagaagtatc
tctatacctgaagatgcagttgctgtggagtcacagaagacagactgcacggatggagaa
aatcagccacgactggcttctgttgggtctgcaatccaaagcaatacagtgggctaccac
agagggagaaaaagaagacccatctctgtaataggtggggtcaatttctatggaagcggt
ccagcagaagaaattgaaggtctgctgacacaacctgccacgcggccgccggttcctgca
caccaggtgcccccctacaaagccgtctctgccaggtttcgcccgctcaccttctcacaa
agtacccccatcggcctggaccgggttgggcgacggcggcagatgagaacatctaatgct
gctgcagatggtgggaccgaatcctcagcgttggtggatgacaatggcagtgaggaagat
tacagttatgaggaactctgccaagccacgccgaggtacctgcagcctggaggggaacag
ctagccattaatgagctgataagcgatggcagcattgtccatgcagaagccctctgggac
catgtgactatggatgatcaagagctgggattcaaagctggagatgtcattagagtccta
gaagcttccaacaaagactggtggtggggaagaattgaggacaaggaagcctggtttcca
gctagctttgtcaggctgcgagtcaatcaggaagaactgccagaaaattgtagtagtatc
caggatgaagaacaagatgcagatatcagcaagcatcgtcagaaaatagctgaaaacaag
gatcagatgagaaccaacgttatacaggaaattatgaacacagaacgagtctatatcaag
cacctcaaggacatctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttc
accacagcccagttaagcaccatttttggaaatattgaggatatttacaaattccaaaga
aagtttctgaaggatcttgagaaacagtacaacaaagaagaacctcatctgagtgagata
ggatcatgctttcttcaacatcaagaaggctttgctatttattcagaatattgtaacaat
catcccagtgcctgcattgaactttccaagctaatgaaacagggcaaataccgtcacttc
tttgaggcctgtcgcttgctccagcagatgattgacattgccattgatggttttcttctc
acgcctgttcagaaaatctgcaaataccctctgcagcttgcagaattgctcaaatatacc
actcaggagcacagtgattataacgacataaaagctgcatatgaggctatgaagaatgta
gcatgcctgatcaatgagcgaaaacgaagattggaaagcatagacaagatagcgcgttgg
caagtgtctatagtagactgggagggcccagatgtgttagccagaagctcggaactcatc
cactcaggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttc
ctttttgaccatcaacttgtgttctgtaagaaggacctattgaggagggacatcttgtat
tataaggatcgtattgacatggatgagatggaacttgtggacactgaagatggcagagac
aaagactttaacattaatgtcaagaatgcctttaagataataaacagagcaacagaagag
attcatttgttctgtgcaaaaaagcaagaagataaaaagagatggatggaggcatgcgaa
agtgaaaggagaagagttcaagaagacaaagaaatgggaatggaaatctcagaaaaccag
aagaaacaagccatgcagaatgcccgtaagtcaaggcatggaaaaatgaaaggtgtaagc
tataacgggtgtcctatgcctccaccacaccaaagcttgcatcccatccatcagcgccac
atcaccgtgcctaccagcatcccacagcagcaggtctttgccctggcagaacccaagcgg
aaaccatccctcttctggcacaccttcaacaagctcaccccgttcaaaaagtga

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