KEGG   Oxyura jamaicensis (ruddy duck): 118167045
Entry
118167045         CDS       T11549                                 
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118167045 (SMARCA5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oja03021]
    118167045 (SMARCA5)
   03036 Chromosome and associated proteins [BR:oja03036]
    118167045 (SMARCA5)
Transcription machinery [BR:oja03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     118167045 (SMARCA5)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    118167045 (SMARCA5)
   RSF complex
    118167045 (SMARCA5)
   WICH complex
    118167045 (SMARCA5)
   B-WICH complex
    118167045 (SMARCA5)
   NORC complex
    118167045 (SMARCA5)
   BRF complex
    118167045 (SMARCA5)
   NuRF complex (fruit fly)
    118167045 (SMARCA5)
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 Myb_DNA-binding DBINO AAA_14
Other DBs
NCBI-GeneID: 118167045
NCBI-ProteinID: XP_035182145
LinkDB
Position
4:complement(join(55239701..55239766,55240705..55240815,55241288..55241500,55242532..55242650,55243597..55243729,55244977..55245099,55245303..55245416,55245968..55246078,55246307..55246426,55246652..55246800,55247453..55247585,55248806..55248958,55249049..55249170,55250753..55250979,55251609..55251718,55252302..55252370,55253317..55253448,55253546..55253701,55254457..55254636,55256507..55256607,55257274..55257374,55258120..55258286,55261118..55261120))
AA seq 970 aa
MQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVGDYRH
RRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQVRGLNWLISLYENGINGIL
ADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGD
KDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI
VREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQKLVER
LHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDK
MRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVL
IFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFMLSTRAGG
LGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEM
KLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDHILERGAK
KTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEPPKRERKANYA
VDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRN
PDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRD
DIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDT
KIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQF
RFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQKRKMDGTPD
GRGRKKKLKL
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgcaaacagacagagcaaacagatttgagtatctgttgaagcagactgagctgtttgct
cacttcattcagcctgctgctcagaaaactccaacttcacctttgaaaatgaaaccagga
cgtccacgaataaagaaggatgagaaacagaatttactgtcagttggcgactaccgacac
cgtagaacagaacaggaagaagacgaggagctgttaacagaaagctccaagacaacaaat
gtctgcactcgatttgaagaatctccatcatatgttaaatggggaaagctgcgtgattac
caggtccgaggactgaactggctcatttctttgtatgaaaatggcatcaatggtatccta
gcagatgaaatgggtctcgggaagacactgcaaacaatttctcttcttggatatatgaaa
cactacagaaatattcctggtcctcacatggtattggttccaaagtccactctacataac
tggatgaatgaattcaagagatgggtacctacacttcgagcagtgtgtttgataggtgac
aaagaccagcgagctgcctttgtcagagatgtgttgttgccaggagaatgggatgtctgc
gtaacatcgtatgaaatgcttatcaaagaaaaatcagtattcaagaagtttaactggaga
tacctagttatagatgaagcccacaggattaaaaatgaaaaatctaagttatcagaaatt
gtgagggaattcaagactacaaatcggctgctattaactggaactccacttcagaacaac
ctacatgaactctgggcacttcttaacttccttttgccagatgtctttaactcatctgaa
gattttgattcatggtttgatacaaacaactgtctaggggatcaaaagttggtggaacgt
ctccatatggtgctacgaccgttcctcctacgtcgcattaaggctgatgtagagaaaagt
ttgcctccaaagaaggaagttaaaatttatgtgggtctcagcaaaatgcagcgagaatgg
tatacaagaatcttaatgaaggatatagacatattgaattctgctgggaagttggacaaa
atgagactgttgaatatccttatgcaactacgaaaatgttgcaatcatccatatctcttt
gatggagcagaacctggtccaccttacacaacagatatgcatttggtcaccaacagtggc
aaaatggtagtattggacaaattactgcctaagttgaaagagcaaggttcaagagtctta
atcttcagccagatgaccagagtcctggatatcttggaggattattgtatgtggagaaat
tacgaatattgtagactggatggacaaacgcctcatgatgagagacaggcttctattaac
gcgtataatgaacctggtagctcaaaatttgtgttcatgttgagtacgcgggcaggaggt
cttggcatcaatttggctactgctgacgttgtaattctgtatgattcagactggaatcca
caagtagatcttcaggctatggatcgagcacacagaattggccaaacaaagactgttaga
gtgttcaggtttatcacagacaatacagtggaagaaagaatagtggaacgtgcagaaatg
aaactccggctagattccatagtcatccagcaaggaagactggtggatcaaaacttgaat
aaacttgggaaggatgaaatgctgcaaatgattagacacggagcaacacatgtgtttgcc
tcaaaggaaagtgagattacagatgaagatattgatcacattttggaaagaggtgcaaag
aagactgcagaaatgaatgaaaaactttcaaagatgggtgaaagctccctcagaaatttc
acaatggatacagagtccagtgtgtataattttgaaggggaagactacagagaaaaacag
aagatggcatttacagagtggattgaaccacctaaacgagaaagaaaagccaattatgca
gtggatgcttactttagagaagctcttcgagtcagtgagccaaaagcacccaaggcaccg
cggcctccaaagcagccaaacgtacaggactttcagttctttcctccacggctctttgaa
ctattggaaaaagagatactctactacaggaaaacaattgggtacaaggtacctcgtaat
cctgatctgcccaatgcagcccaagcacaaaaggaagagcagcttaagattgacgaggct
gaacctcttaatgatgaagaactagaagaaaaagagaagcttctaacccagggatttact
aactggaataagagagattttaaccagttcatcaaagctaatgagaagtggggccgtgat
gatatcgaaaatatagcacgagaagtagaaggaaaaaccccagaggaagtcattgagtat
tcagctgtgttctgggaaaggtgcaacgaactccaagacatcgagaagatcatggctcag
atagaaagaggagaagccagaattcagagacgaattagcataaaaaaagcacttgataca
aagattggcagatacaaagcccccttccaccagctaagaatatcatatggtaccaataaa
gggaagaattatactgaagaagaggatcgctttctaatctgtatgcttcacaagctagga
tttgataaggaaaatgtctatgatgaattaagacagtgtatccgaaactcgccacaattc
agatttgactggtttctcaaatccagaactgcaatggagctgcaaaggagatgcaatact
ttaatcaccctcattgaaagagaaaacatggaactggaagaaaaggaaaaggcagaaaag
aagaaacgtggaccaaaaccatcttcggcacagaagcgcaaaatggatggtactcctgat
ggtcgtggaagaaaaaagaagctaaagctgtga

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