Oxyura jamaicensis (ruddy duck): 118167254
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Entry
118167254 CDS
T11549
Symbol
CDX4
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
oja Oxyura jamaicensis (ruddy duck)
Brite
KEGG Orthology (KO) [BR:
oja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oja03000
]
118167254 (CDX4)
Transcription factors [BR:
oja03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
118167254 (CDX4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
MS_C
DUF7645
Motif
Other DBs
NCBI-GeneID:
118167254
NCBI-ProteinID:
XP_035182433
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All DBs
Position
4:join(16122557..16122986,16127866..16128011,16130632..16130838)
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AA seq
260 aa
AA seq
DB search
MYVSSLLDKENSMYPGPARANNNLPVQNFASAPPYSDYMGYHHVPALDNHGQPAGTWGSH
YGPQREDWNAYGPGPSSTVAAAQINGSSPGQVSYSSADYSSLHPAGSGGLPPVDTINAQQ
ISPNSQRHSSYEWMRKTVQTNTTGKTRTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKS
ELAANLGLSERQVKIWFQNRRAKERKMIKKKISQFDGSGGSVQSDSGSLSPNEIPGSLFP
PPHGINGLQSTDIHQVIVSE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctctctcttggataaagagaacagcatgtatccaggacctgcaagggct
aacaacaacctgccagtgcaaaacttcgcatctgctcccccctactcagactacatggga
tatcaccatgtgccagccctggacaaccacggacagcctgcgggaacctggggatcccac
tatggcccacagagggaggactggaacgcttatggcccaggaccttccagcacggtggct
gctgcacagatcaatggctcgtctcctgggcaggtctcctacagctctgctgattacagc
tccctccatcctgctggatccggggggttacctcctgtagatacaattaatgcacagcaa
atctctcccaacagccaaaggcacagctcttatgaatggatgaggaaaacagtgcaaacc
aacactactggtaaaacaagaacaaaagaaaagtaccgagttgtttacacagaccaccag
agactagaattagagaaggaatttcactgcaacagatacattacaataaggagaaagtca
gaacttgcagcaaacctgggactatctgaaagacaggtgaaaatctggttccagaatcgc
agagccaaagaaagaaaaatgatcaagaagaaaatctctcagtttgatggtagcgggggc
tcagttcagagcgactctggttcactcagcccaaatgaaatacctggttccctgttccca
ccaccacatggaataaacggattacagtccactgacattcatcaggtcatagtttcagaa
tga
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