KEGG   Oxyura jamaicensis (ruddy duck): 118167323
Entry
118167323         CDS       T11549                                 
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
  KO
K14303  nuclear pore complex protein Nup160
Organism
oja  Oxyura jamaicensis (ruddy duck)
Pathway
oja03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118167323 (NUP160)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oja03019]
    118167323 (NUP160)
   03036 Chromosome and associated proteins [BR:oja03036]
    118167323 (NUP160)
Messenger RNA biogenesis [BR:oja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118167323 (NUP160)
Chromosome and associated proteins [BR:oja03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118167323 (NUP160)
SSDB
Other DBs
NCBI-GeneID: 118167323
NCBI-ProteinID: XP_035182489
LinkDB
Position
5:join(29117999..29118201,29118805..29119015,29120594..29120816,29121029..29121107,29121885..29121999,29122695..29122853,29123798..29123875,29124090..29124187,29125003..29125087,29125551..29125619,29126349..29126432,29126836..29127006,29127128..29127227,29128909..29129089,29129710..29129825,29129929..29130089,29131233..29131366,29131671..29131741,29133163..29133322,29133838..29133907,29136789..29136887,29137148..29137267,29138100..29138195,29138304..29138398,29139147..29139243,29139321..29139426,29139512..29139672,29140387..29140447,29141219..29141329,29142225..29142348,29143105..29143206,29143508..29143649,29143859..29143984,29144129..29144233,29144323..29144409)
AA seq 1399 aa
MAAGLAERSCLELGPAARAPPRRLREVAFSPPGTSPLPLGRYGDSAGGFCYRECAQLGAA
TRNRFVRWTTSGDTLELVEESLDNELLNNAVRLRIQGCPLLPGGVHICEVQSHLVVLLVT
VQSVHRVVLPHPACSYRSELIMESQIQSVFTDIGKINFRDPANYYLIPSVPGLASNSVAS
AAWLSSEGEALFALPSAAGGIFVIKLPPHDVPGTVSVVELKQSSVVQRFLTGWMPTAIRG
DGGPSDLPISLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLA
AGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLV
DFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRHDQDPRETY
LEYLFMPGRFTNAAIQKALQIFSQGTERHMDLTWDELKKEVTLAVENEFQSSVTEYECSP
EEFWQLQVEFWSKFYACCLQYQEALSRPLALHLNPYTSMVCLLKKGSLSFLVPCSLVDHL
YLLSNEHLLMEDDAAILDDSFIADLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRL
QPPEKAAEQILEDLIANDTENVMEDIHSKLQEIRNPIHAIGVLIREMDYETDADMERAHP
LNMRMNLTQLYGSGTAVSVVCWGVCKIATIRFLICRDLLILQQLLLRLGDPMVLGGGQLF
QSQQDLLHRTSPLLLSYYLIRWASQCLASDVPVDTLESNLQHLSVLELADTTALTTHKLV
SSPQTIVELFFREVARKHIVSRLFLQPNTSLAETSLNWPHLITAIVADFLPLLWPSNPGF
LFPECLMGSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFCQAASE
VGREEFLDRLIQPEEGEMVSTPRLQYYNKVLRLLDMVGLPELVIQLASLAIMESADDWRS
QATLRTCIFKHHLDLGHNSEAYVALTQNPDPSRQLDCLRQLVVVLCERSQLQELVEFPYV
NLHNEVVGIIESHARAVDLMTHNYYELLYAFHIYRHNYRKAGSVMFEYGMRLGREVRTVR
GLQKQGNCFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGEYTAVPTTRQIE
ILELEDLEKECVLARIRLALVQHDLSTAAVAGSSTPKEMVALLVRAGLFDTAITLCQTFK
LPLTPVFEGLTFKCIKLQLGGEAAQAEAWDWLAANQLSALVTTKESSATDEAWRLLSSYL
ERYPSQNSLYHRCVINKLLAHGIPLPNWLINSYKKVDAAELLRLYLNYDLLEEAADLVLE
YIDAVLGKGHQYFGIEHPLSATAPMVWLPYTAIDQLLQALQESTTNHYNVMLYQKLHDKL
EDYHQKVSLASQDRLYWQN
NT seq 4200 nt   +upstreamnt  +downstreamnt
atggcggcggggctggcggagcgcagctgcctggagctgggccccgcggcccgggccccg
ccgaggcggctgcgggaggtggcgttcagcccccccggcacctcgccgctacccctgggg
cgttacggggacagcgcaggggggttctgctaccgggagtgcgcccagctgggcgccgcc
accaggaaccgcttcgtcaggtggacaacgtcaggggacacgctggagctggtggaggag
tccctggacaacgagctgctgaacaacgccgtgaggctgcgcatccagggctgcccgctg
ctgccgggcggcgtgcacatctgcgaggtgcagagccacctggtcgtgctgctggtcacc
gtgcagagcgtgcaccgggtggtgttgccccatccagcctgctcgtatcgcagcgagctg
ataatggagagccagattcagtccgtgtttacagatatcggcaaaatcaacttcagagac
cctgccaattactacctgatccccagcgtgccgggcctggcgtccaactcggtcgcctcg
gcggcctggctgagcagcgagggggaggctctgttcgcgctgccctctgcggcggggggc
atcttcgtcatcaagctgccccctcacgacgtgccgggaacggtttcggtggtggagttg
aaacagagctcggtggtgcagcgcttcctcaccggttggatgccgactgccatcagaggt
gacggcggcccgtcagacctgcccatcagcctctcggttcactgcctggatcacgatgcc
tttctttttgctctctgccaggaccacaagcttaggatgtggtcctacaaggatcaaatg
tgcctgatggttgcggatctgctggagttcatgccggtcagcagggacctgcggcttgcg
gccggcaccgggcaccgactgcggctggccttctcccagtccctggggctttacctcggc
gtgtacatgcacgcgcccaagcgagggcagttctgtgtcttccagctggtgagcaccgag
agcaaccgctacagccttgaccacatatcctcgctgttctcctcccaggagactcttgtt
gactttgccttaacctcggctgagatctgggcgctgtggcacaacgaggagaaccagacc
gttgtaaaatacatcaactttgagcaaaatgttgcgggccagtggaaccaggtcttcgtg
cagcctctgcctgaggaggaggtgacggttcgacatgatcaggaccccagggaaacctac
ctagagtatctcttcatgcctggccgtttcacaaacgcagctatccagaaggctttacag
atcttttctcaaggaactgagagacacatggacctgacatgggacgagttaaaaaaagag
gttaccttagctgtggaaaacgagttccagagcagcgtgacagaatacgagtgctccccg
gaggagttctggcagctgcaggtggagttctggtccaagttctatgcctgctgccttcag
taccaggaagcgctctcgcggcccctggccctgcacctgaacccctacaccagcatggtg
tgcctgctgaagaaggggtccctgtctttccttgtgccctgctccttggtggaccacctc
tatctcctctctaacgagcacctgctgatggaggacgatgctgccatccttgatgattct
ttcattgcagatttggagatgtctcgtgatgttgtctgtcttgtccagtgccttcgactg
atcggagaatcaatttccatggaaatggcattcataatggaaatggcttgctcccgcctc
cagcctccagaaaaggctgcagagcagatcctggaggacttgatagctaatgacacggaa
aatgtgatggaggatatacacagcaaactgcaggagatcaggaaccccatccatgccatc
ggagtgctcatccgagaaatggactacgagacagacgctgacatggaaagagctcatcct
ctaaatatgcgcatgaacctcacccagctgtacggcagcggtacggctgtcagcgtggtt
tgctggggggtatgtaagattgccacgatccgtttcctgatctgtcgggacctgttgatc
ctccaacagctgttgctgcggctcggagatcctatggtgttgggcgggggacagctgttc
cagtcgcagcaggacctgctgcaccgcacctcccctctgctgctgtcgtactacctgatc
aggtgggccagccagtgcctggcgtcggacgtccctgtcgacacgctggaatctaatctg
cagcatctctctgtgctggagttagcagacactactgctctaacaacccataaactagta
tccagccctcagacaatcgtggagctcttctttcgggaggtggccagaaagcacatcgta
tctcgactcttcctgcaacccaacacctcattggctgaaacaagcttgaactggccccat
ctcatcacggcgatagtggcagactttctgccgctcctatggcccagcaatcctggcttc
ctcttcccggagtgcctgatggggagctgtcagtacacccagctgcaggagtacatccgc
ctgctgcagccgtggtgccatgtgaacatgggctcctgctgcttcatgatgggcaggtgc
tacctcgtcatgggcgagggccacaaggctctggactgcttctgccaagccgcctcagag
gtgggaagagaagagttcttggacaggctgatccaacccgaggagggcgagatggtctcc
acgccgcgcctgcagtactacaacaaggttctgcgcttgctggacatggttggcctgccg
gagctggtcatccagctggcttccctggccatcatggagtcggcagatgactggagaagc
caggctaccttgaggacttgcatcttcaaacaccacttggatttaggacacaacagtgaa
gcatatgtagccttaacgcagaacccagatccaagcaggcagctggactgtctgcgccag
ctagtggtggttctctgtgagcgctcccagctccaggaactggtggagttcccctacgtg
aacctccataacgaggtcgtggggatcatcgagtcccacgctcgagcagtggacctgatg
acccacaattactacgagctgctctacgctttccacatctaccgccacaactaccgcaag
gctggatcggtgatgtttgaatacggcatgcgcctgggccgggaggtgcggacggtccgg
gggctccagaagcaggggaactgtttcctcgctgccattaactgcttacggttgatccgc
ccggagtacgcctggatagtgcagccagcttcaggagctgtgtatgagcgtcctggagca
tccccgaagagaagccacgatggggagtacacggctgttcccacaacgcgccaaatcgag
atcctggagctagaggatttggaaaaggagtgtgtgctggcccggatccggctggctctg
gtgcagcatgacctgtcaacagccgctgtggcaggcagctccacgcccaaggaaatggtt
gctctcttggtccgggctggcctcttcgacaccgccatcaccctgtgccagacattcaag
ctgccgctgacgcccgtctttgaggggctcactttcaagtgcatcaagctgcagctggga
ggggaggcagcgcaagcggaggcctgggactggctagcagcaaaccagctctctgcgctg
gttaccaccaaggagtccagcgccacggatgaagcctggcggctgctgtcgtcctatttg
gagcgttacccatcgcagaacagcctgtaccatcgctgcgtcatcaacaagctcctggca
cacgggatccctctgcccaactggctcatcaacagctacaagaaagtggatgctgctgag
ctgctgcgcctctacctcaactacgacctgctggaggaggctgcggatttggtcctggag
tacatagatgctgtgctgggcaagggtcaccagtactttggaattgagcatccactgtcg
gccacggcccccatggtgtggctcccctacaccgccatcgaccagctgctgcaggccctg
caggagagcaccaccaaccactacaacgtcatgctctaccagaagctgcacgacaagctg
gaggactaccaccagaaggtcagcctggcctcccaggaccgcctgtactggcagaactag

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